Pairwise Alignments

Query, 452 a.a., Uncharacterized transporter YebQ, major facilitator superfamily (MFS) from Variovorax sp. SCN45

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 2e-31
 Identities = 100/405 (24%), Positives = 170/405 (41%), Gaps = 17/405 (4%)

Query: 6   LGLIVSVLDGTIVNLALPGIARELQASPSQAIWVVNAYQIATLVMLLPLASLGDLVGYRR 65
           L   + VLD TI N+ALP I+  L  S  Q  WV+ ++ ++  + L     L    G  +
Sbjct: 23  LATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGEVK 82

Query: 66  VYLVGLAVFTLSSLAATFANSLATLTAARAFQGLGAAGIMSVNAALVRLTYPSSQLGKGM 125
           +++    +F L+S     A S+  L   R  QG+ A  +  +   L+   YP ++ G  +
Sbjct: 83  LFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGMAL 142

Query: 126 ALNSLVVATSSVAGPSVAAAILSVASWPWLFAINVPLGIVTFALGMRALPFNRVAPAAGL 185
           AL ++V   + +AGP +   I    SWPW+F INVP+G+   A+  + +   R  P    
Sbjct: 143 ALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQM---RTRPVVTS 199

Query: 186 RFSPVD-VGLNVLMFSLVFLGVDRLGVREGPVQGAGGSQASAWGILLAGLAVGFVYLR-- 242
           R  P+D +GL  L+     +GV  L V           ++S    ++ G  +  V+L   
Sbjct: 200 R-QPMDYIGLLTLI-----IGVGALQVVLDKGNDLDWFESS---FIIVGSLISVVFLAVF 250

Query: 243 --RQRKQAVPLFPIDLLRIPVFALSMGTSVAAFCAQMLAYIALPFLLLDAYGRSHIEAGL 300
              +     P+  + L     F +     V  +       + LP  L    G +   AGL
Sbjct: 251 VIWELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGL 310

Query: 301 LITAWPLGIVVMAPIAGRLIGRYPDGLLGGIGLALLASGLALLAALPAHPGNADIAWRMA 360
            +    L  V+M+P  G+   R+   +L G+    + +   + A   +      +A    
Sbjct: 311 AVAPIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQL 370

Query: 361 LCGLGFGLFQSPNNHTIVTSPPAHRSGAASGMLGTARLTGQTLGA 405
             G+G  LF  P    +++  P H+    SG+    R  G +  A
Sbjct: 371 FMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAA 415