Pairwise Alignments

Query, 432 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 440 a.a., L-arabinose transporter (from data) from Pseudomonas simiae WCS417

 Score =  386 bits (991), Expect = e-112
 Identities = 191/413 (46%), Positives = 272/413 (65%), Gaps = 1/413 (0%)

Query: 5   EQRTISKISWRLLPLLMISYFIAYLDRVNLGFAGAAMSKDLGFTAAVFGSAAGIFFLAYF 64
           E R I +I+ +L+P L++ Y IAY+DR  +GFA   M  D+G   A +G  AG+FF+ YF
Sbjct: 4   ELRLIRRITLKLIPFLILLYLIAYVDRSAVGFAKLHMGADVGIGDAAYGLGAGLFFIGYF 63

Query: 65  LFEVPSNMALERFGARRWIARIMFSWGILSAAQAWVGGATSFNIVRFLLGIAEAGFFPGV 124
           LFE+PSN+ L+RFGARRW ARIM +WG ++   A+V G  SF ++RFLLG AEAGFFPGV
Sbjct: 64  LFEIPSNLMLDRFGARRWFARIMITWGAITIGMAFVQGPHSFYVMRFLLGAAEAGFFPGV 123

Query: 125 IFYITLWFPAAYRARIVGWFMFAIPISTVIGSPISGYILNMDGVGGMHGWQWLFILEALP 184
           ++YIT WFP  +R +I+G F+ + PI+ +I  P+SG +L MDG+ G+HGWQWLFI+   P
Sbjct: 124 LYYITQWFPVRHRGKILGLFILSQPIAMMITGPVSGGLLGMDGMLGLHGWQWLFIVIGTP 183

Query: 185 SLVLTFFVLMYLPDGPKDAKWLTDEERTWLQRTLDAERQNRESINKISWKQSLLNPRVIG 244
           +++LT+ VL YLPDGPK   W++++E+ WL   L  + Q        +   +L + RV+ 
Sbjct: 184 AILLTWPVLRYLPDGPKQVTWMSEDEKAWLTGELAKDLQAYGQTRHGNPLHALKDKRVLL 243

Query: 245 LGFVYMGITVPLYGLSFFLPQIIKGFGGLSNVQIGFINAFPYLVGAVAMLFWTRASDARK 304
           L   Y+ +T+ +YGL  +LP +IK FGG S++  GFI+A PY+ G + +L   R+SD   
Sbjct: 244 LALFYLPVTLSIYGLGLWLPTLIKQFGG-SDLTTGFISAVPYIFGIIGLLIIPRSSDRLN 302

Query: 305 ERKWFLLIPLACIFVGLVLAAQTSSPVPKMAAVTLAAFGIFSALPTFWTLPTAILSGTAA 364
           +R   L +      +GL  +A  + P+ +MAA+ LAAF +FS    FWTLP    +G +A
Sbjct: 303 DRYGHLAVLYVLGAIGLFFSAWLTVPLLQMAALCLAAFAMFSCTAVFWTLPGRFFAGASA 362

Query: 365 AAGIAWINSIGNLGGYIGPTIFGALKDRMGNDIYAVIFLALLSVVAFVLVLII 417
           AAGIA INS+GNLGGYIGP + GALK+  GN    + FL+ + V   VL  ++
Sbjct: 363 AAGIALINSVGNLGGYIGPFVIGALKEYTGNLASGLYFLSGVMVFGLVLTFVV 415