Pairwise Alignments

Query, 325 a.a., Transcriptional regulator PA4174, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., predicted DNA-binding transcriptional regulator (RefSeq) from Escherichia coli BW25113

 Score =  187 bits (476), Expect = 2e-52
 Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 4/298 (1%)

Query: 1   MDRFDAMQAFARVVEAGSFTKAADTLHMSKTTVTQLVQQLEARLRVKLLNRTTRKVNVTA 60
           MD+  AMQ F +V E  SF++AAD   + K +V++ +Q LE +L  +LL RTTR+V +T 
Sbjct: 1   MDKIHAMQLFIKVAELESFSRAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTP 60

Query: 61  DGAAYYERVVRLLADMDDAETSLSGASASPRGRLRVDVPSPLARMILVPALPAFHARHPD 120
           +G  YY+R   +L+++ + +      + S  G+LR+D+P  +A+ +L+P L  F   HP 
Sbjct: 61  EGMTYYQRAKDVLSNLSELDGLFQQDATSISGKLRIDIPPGIAKSLLLPRLSEFLYLHPG 120

Query: 121 IQLDMGVSDRVVDVIGENVDCVVRGGELTDQSLMARRVGDLQLGVYAAPSYLALAGTPAH 180
           I+L++   DR VD++ +  DCV+R G L +  ++AR +G L +   A+P YL   G P  
Sbjct: 121 IELELSSHDRPVDILHDGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQS 180

Query: 181 PRELEDTHHRIVGFLWSRNGKTFPYAIWREEGDERIEVQGRYVLSVDDGNAYLAAGLAGL 240
           P +L  T H IV +          + +    G +  +  G  +L+V+    YL AGLAGL
Sbjct: 181 PDDL--TSHAIVRYTPHLGVHPLGFEVASVNGVQWFKSGG--MLTVNSSENYLTAGLAGL 236

Query: 241 GVLWLPDYMARPHLASGELVPLFQDWRLDPMPLYLAFPPNRHVSAKLRVFIDWVAELM 298
           G++ +P    R  L +G L+ +   +R +P+ L L +P  R +S ++ +F+ W+A +M
Sbjct: 237 GIIQIPRIAVREALRAGRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVM 294