Pairwise Alignments

Query, 475 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 3e-44
 Identities = 115/395 (29%), Positives = 191/395 (48%), Gaps = 15/395 (3%)

Query: 3   MVAIEATIVSTVMPQIASELG-GLHLYSWVFASFLLAQTAMTVVFGKLSDLYGRKPIMFV 61
           M  ++ TI +  +P I+  LG      +WV  SF ++      + G LS  +G   +   
Sbjct: 27  MQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGEVKLFIW 86

Query: 62  GIAIFVLGSVLAGFAWSMPAMICFRLIQGIGAGAIQPVSLTIVGDLYPARERGKVQGYLA 121
              +FVL S L G A SMP ++ FR++QG+ AG + P++ T++  +YP  +RG     LA
Sbjct: 87  ATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGMALALLA 146

Query: 122 SVWAVSAVVGPMIGALIVQKLSWAWIFWVNVPIGLAAAAGFWLYLHEAPSV-RRSSIDIA 180
            V  V+ + GP++G  I    SW WIF++NVPIGL AAA     +   P V  R  +D  
Sbjct: 147 MVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRPVVTSRQPMDYI 206

Query: 181 GAVLFTIGIAALMIAL---TDFGIGDTGSAALWTAVFAVTLVLFVMQERRAADPMVSLKL 237
           G +   IG+ AL + L    D    ++    + + +  V L +FV+ E     P+V+L+L
Sbjct: 207 GLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELTDRHPVVNLRL 266

Query: 238 WGARIIATVNGAAMLGGMV-LIGITTFLPMYVQVVLQRSSVTAGLTLTMVMLGWPIGATL 296
           +  R    +    ++GG     GI   LP ++Q  +  ++  AGL +  + L   I +  
Sbjct: 267 FVHRNF-RIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGLLPVIMSPF 325

Query: 297 TSRTFHRIGLWRMVLIGGALIPVGTAAFALLSAGSTPLL----AAVGSFIMGLGMGVMSL 352
             +  HR  L   VL G A + +GT+ +  + AG T  +     A+    MG+G+ +  +
Sbjct: 326 VGKYAHRFDL--RVLAGLAFLAIGTSCY--MRAGFTSEVDFQHVALVQLFMGIGVALFFM 381

Query: 353 ASLILIQEAVDVAQRGVATASNVFSRNLGSALGAT 387
            +L ++   +   Q    +    F R LG +  A+
Sbjct: 382 PTLSILLSDLPPHQIADGSGLATFLRTLGGSFAAS 416