Pairwise Alignments

Query, 617 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

 Score =  329 bits (843), Expect = 2e-94
 Identities = 215/592 (36%), Positives = 312/592 (52%), Gaps = 43/592 (7%)

Query: 32  ETFDAVLDICERIAREKYAPFNRTVDTQEPHFDGEKVILPQATHDAHKAFVESGMMSAAQ 91
           ET +A+L+   ++  +  AP +R  D Q   +D   V  P     A+  + + G +    
Sbjct: 38  ETVEAILEEAGKVTAKSIAPLSRGGDEQGCRWDNTAVFTPDGFPQAYATYAQGGWVGVGG 97

Query: 92  DYDIGGMQLPYTMQAAANSFFAMASVSIGSN-MLTSGNANLLMVHGTDMQKNVFAKNEFS 150
           D   GGM +P  + A        +S++ G   MLTSG    +  H ++  K  +    +S
Sbjct: 98  DPIFGGMGMPKAVSAQVEEMINSSSLAFGLYPMLTSGACVSINTHASEALKATYLPKMYS 157

Query: 151 GRWAGTMCLSEPQAGSSLSDVATRAVPDGEGFQDDPLGPRYRLTGNKMWISAGDHELTEN 210
           G W+G+MCL+E  AG+ L  + T+A P  +G         Y+++G K++I+ G+H+LT+N
Sbjct: 158 GEWSGSMCLTEAHAGTDLGIIRTKAEPQADG--------SYKVSGTKIFITGGEHDLTDN 209

Query: 211 IVHIVLAKIPDENGKLVPGTRGISLFIVPKRMVDTKGKLTGQRNDVALAGLNHKLGWRGT 270
           I+H+VLAK+PD       G +GISLF+VPK MV+  G L G RN V+   + HK+G + +
Sbjct: 210 IIHLVLAKLPDAPA----GPKGISLFLVPKFMVNADGSL-GARNTVSCGSIEHKMGIQAS 264

Query: 271 TNTLLNFGEGKYPVDGKAGAVGYLVGEPGKGLHCMFHMMNEARIGVGTAATMLGMAGYHA 330
              ++NF E          AVGYLVGEP +GL  MF MMN  R+GVG      G   Y  
Sbjct: 265 ATCVMNFDE----------AVGYLVGEPNRGLAAMFTMMNYERLGVGIQGLASGERSYQN 314

Query: 331 SLEYAKTRPQGRLVKKPQAAGTAVAKDSAAPQVRIIEHADVRRMLLAQKAYCEGALALEL 390
           ++EYA+ R Q R      A   A A+D  A    II H DVRRMLL  KA  EG  A   
Sbjct: 315 AIEYARDRLQSR------APTGAQAQDKMADP--IIVHPDVRRMLLTMKAANEGGRAFST 366

Query: 391 YCARLVDEQK-TGDAQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGYTRDF 449
           Y A  +D  K + DA A + A  L+ +LTP+AK++ S+  LE   L  QV GG+GY R++
Sbjct: 367 YVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGHGYIREW 426

Query: 450 PVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLMEKGRGLQLLAGRMTATIASAAKVPALA 509
             EQ  RD R+  I+EGT+GIQA DL+GRK++   G    L A  +   IAS+     LA
Sbjct: 427 GQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRGFIASSG--TELA 484

Query: 510 AHAKALGAALQRIGSATEAAWFTG----DPADALANAVPYMQAFGHTVLAWIWLDVARRA 565
              K L AA+  +   T  AW       +P +  A +V Y+ AFG+   A++W  +A+ A
Sbjct: 485 EFTKPLSAAVDNLDELT--AWVLDRAKTNPNEIGAASVEYLHAFGYMAYAYMWARMAKAA 542

Query: 566 LEKDGEKARAVTAGKIGATDYFFHYELPKIGAWLNVVETRDPTCTALPEDAF 617
           L K+ E+     A K+G   ++F   LP+I +    V+    +   L E  F
Sbjct: 543 LGKESEE--DFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDEALF 592