Pairwise Alignments

Query, 617 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 600 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  526 bits (1355), Expect = e-153
 Identities = 308/620 (49%), Positives = 384/620 (61%), Gaps = 39/620 (6%)

Query: 7   LDFLLYDWLDAESLNQRDRFADHSRETFDAVLDICERIAREKYAPFNRTVDTQEPHF-DG 65
           L F LY+ LDAE+L  R RFA+HSRETFDA L     IA + +AP NR  D  EP + DG
Sbjct: 11  LAFELYEVLDAEALTLRPRFAEHSRETFDAALTTARTIAEKYFAPHNRKADENEPRYVDG 70

Query: 66  EKVILPQATHDAHKAFVESGMMSAAQDYDIGGMQLPYTMQAAANSFFAMASVSIGSN-ML 124
              ++P+    A  AF+E+G ++A +D+++GGMQLP  +  A  + F  A+    +   L
Sbjct: 71  RAELIPEVK-PAVDAFLEAGFLNANRDFEVGGMQLPSLVSQACIAHFQAANAGTTAYPFL 129

Query: 125 TSGNANLLMVHGTDMQKNVFAKNEFSGRWAGTMCLSEPQAGSSLSDVATRAVPDGEGFQD 184
           T G ANL+   G+D QK +F +    GR+ GTM L+EP AGSSL+D+ TRA P G+G   
Sbjct: 130 TMGAANLIESFGSDEQKRLFLQPMIDGRYFGTMALTEPHAGSSLADIRTRAEPAGDG--- 186

Query: 185 DPLGPRYRLTGNKMWISAGDHELTENIVHIVLAKIPDENGKLVPGTRGISLFIVPKRMVD 244
                 YRL GNK++IS GDHEL+ENIVH+VLAK+PD      PG +GISLFIVPK  V+
Sbjct: 187 -----SYRLKGNKIFISGGDHELSENIVHMVLAKLPDAP----PGVKGISLFIVPKYHVN 237

Query: 245 TKGKLTGQRNDVALAGLNHKLGWRGTTNTLLNFGEGKYPVDGKAGAVGYLVGEPGKGLHC 304
             G   G RNDV LAGL HK+GWRGTT+T LNFG+           VGYLVG+P +GL C
Sbjct: 238 PNGS-RGPRNDVLLAGLFHKMGWRGTTSTALNFGDN-------GQCVGYLVGQPHQGLAC 289

Query: 305 MFHMMNEARIGVGTAATMLGMAGYHASLEYAKTRPQGRLVKKPQAAGTAVAKDSAAPQVR 364
           MF MMNEARIGVG  A MLG AGY  SLEYA+ RPQGRL            KD  +P V 
Sbjct: 290 MFQMMNEARIGVGMGAVMLGYAGYLYSLEYARQRPQGRLPDN---------KDPHSPAVP 340

Query: 365 IIEHADVRRMLLAQKAYCEGALALELYCARLVDEQKTG-DAQAADDARLLLEVLTPIAKS 423
           IIEH DV+RMLLAQKAY EGA  L LY ARL D+  T  D  A   A+ LL++LTPI KS
Sbjct: 341 IIEHTDVKRMLLAQKAYVEGAFDLGLYAARLFDDTHTAPDENARKPAQDLLDLLTPIVKS 400

Query: 424 WPSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLME 483
           WPS +CL+AN LAIQ+ GG+GYTR++PVEQY+RDNRLN IHEGT GIQ+ DLLGRK+   
Sbjct: 401 WPSAFCLKANELAIQILGGHGYTREYPVEQYYRDNRLNPIHEGTEGIQSLDLLGRKLAQH 460

Query: 484 KGRGLQLLAGRMTATIASAAKVPALAAHAKALGAALQRIGSATEAA---WFTGDPADALA 540
            G GL+ L   + AT   A+  P L    + L     R+   T A       G  A ALA
Sbjct: 461 NGAGLKQLIRLIAATCERASHHPNLDPLRQPLEQLANRLQGVTLALLGDLAQGKVAGALA 520

Query: 541 NAVPYMQAFGHTVLAWIWLDVARRA---LEKDGEKARAVTAGKIGATDYFFHYELPKIGA 597
           N+  Y++AFGH V+ W WL+ A  A   + K     R    GK+ A  YF  +E+P    
Sbjct: 521 NSALYLKAFGHCVIGWRWLEQAVHAELGMLKGTAADRDFYLGKLQAARYFLTWEVPGCHN 580

Query: 598 WLNVVETRDPTCTALPEDAF 617
            L ++E  D TC  + +  F
Sbjct: 581 ELALLEAHDDTCLGMQDGWF 600