Pairwise Alignments

Query, 617 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 589 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  313 bits (801), Expect = 2e-89
 Identities = 211/594 (35%), Positives = 312/594 (52%), Gaps = 48/594 (8%)

Query: 9   FLLYDWLDAESLNQR-DRFADH-SRETFDAVLDICERIAREKYAPFNRTVDTQEPHFDGE 66
           F+L+D  +A  L  R    A+    +T DA+L+   ++  +  AP +R  D Q   FD  
Sbjct: 13  FVLHDVFNASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSRNGDEQGVCFDAG 72

Query: 67  KVILPQATHDAHKAFVESGMMSAAQDYDIGGMQLPYTMQAAANSFFAMASVSIGS-NMLT 125
           +V  P+   +A   + E G +    + + GGM +P  +          A  S    + L+
Sbjct: 73  QVTTPEGFREAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYAADCSFSLYSALS 132

Query: 126 SGNANLLMVHGTDMQKNVFAKNEFSGRWAGTMCLSEPQAGSSLSDVATRAVPDGEGFQDD 185
           +G+   +  H ++  K  +    + GRWAGTMCL+EP AG+ L  + TRA P  +G    
Sbjct: 133 AGSCLAIDAHASEALKATYLPPLYEGRWAGTMCLTEPHAGTDLGLIRTRAEPQADG---- 188

Query: 186 PLGPRYRLTGNKMWISAGDHELTENIVHIVLAKIPDENGKLVPGTRGISLFIVPKRMVDT 245
                 R++G+K++I+ G+ +LTENIVH+VLAK+PD       G +GISLF+VPK +V+ 
Sbjct: 189 ----SVRISGSKIFITGGEQDLTENIVHLVLAKMPDAPA----GAKGISLFLVPKFLVEA 240

Query: 246 KGKLTGQRNDVALAGLNHKLGWRGTTNTLLNFGEGKYPVDGKAGAVGYLVGEPGKGLHCM 305
            G+L G RN V    + HK+G + +   ++NF           GA+GYLVGEP KGL  M
Sbjct: 241 DGRL-GARNAVHCGSIEHKMGIKASATCVMNFD----------GAIGYLVGEPNKGLTAM 289

Query: 306 FHMMNEARIGVGTAATMLGMAGYHASLEYAKTRPQGRLVKKPQAAGTAVAKDSAAPQVRI 365
           F MMN  R+ +G        A Y ++  YA  R Q R    PQA       D AA    I
Sbjct: 290 FTMMNYERLSIGIQGIGCAEASYQSAARYANERLQSRAATGPQA------HDKAADP--I 341

Query: 366 IEHADVRRMLLAQKAYCEGALALELYCARLVDEQKTG-DAQAADDARLLLEVLTPIAKSW 424
           I H DVRRMLL  +   E   A  +Y  + +D  +   DA   + A+ L+ +LTP+AK++
Sbjct: 342 IHHGDVRRMLLTMRTLTEAGRAFAVYVGQQLDVARYAEDAGEREHAQRLVALLTPVAKAF 401

Query: 425 PSEWCLEANSLAIQVHGGYGYTRDFPVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLMEK 484
            ++  LE+  L  QV+GG+GY R++  EQ  RD R+  I+EGT+GIQA DLLGRKVL + 
Sbjct: 402 FTDNGLESCVLGQQVYGGHGYIREWGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADG 461

Query: 485 GRGLQLLAGRMTATIASAAKVPALAAHAKALGAALQRIGSATEAAWF---TGDPADAL-A 540
           G+ L   A  + A    A        H +AL A+L R+ +   ++W     G+ A+ + A
Sbjct: 462 GQALASFASEVRAFSVDA------PLHREALQASLARLEAT--SSWLRAQAGEDANLVSA 513

Query: 541 NAVPYMQAFGHTVLAWIWLDVARRALEKDGEKARAVTAGKIGATDYFFHYELPK 594
            AV Y+Q FG T  A++W  +A  AL K  E   A    K+    ++F   LP+
Sbjct: 514 VAVEYLQLFGLTAYAYMWARMAAVALAKRDED-DAFHGAKLACAAFYFQRVLPR 566