Pairwise Alignments

Query, 617 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  311 bits (798), Expect = 4e-89
 Identities = 207/601 (34%), Positives = 307/601 (51%), Gaps = 47/601 (7%)

Query: 28  DHSRETFDAVLDICERIAREKYAPFNRTVDTQEPHFDGEKVILPQATHDAHKAFVESGMM 87
           D + +  DA+L+   +   +  +P NR  D +   +    V  P    +A++ FVE G  
Sbjct: 33  DATPDMVDAILEEGAKFCEQVLSPLNRVGDQEGCTWSESGVKTPTGFKEAYQQFVEGGWP 92

Query: 88  SAAQDYDIGGMQLPYTMQAAANSFFAMASVSIGSNM-LTSGNANLLMVHGTDMQKNVFAK 146
           S A D + GG  LP ++  A +     ++ S G    L+ G  N +  HGT  Q++ +  
Sbjct: 93  SLAHDVEHGGQGLPESLGLALSEMVGGSNWSWGMYPGLSHGAMNTISAHGTAEQQHTYLT 152

Query: 147 NEFSGRWAGTMCLSEPQAGSSLSDVATRAVPDGEGFQDDPLGPRYRLTGNKMWISAGDHE 206
              SG W GTMCL+EP  G+ L  + T+A P  +G         Y+++G K++ISAG+H+
Sbjct: 153 KLVSGEWTGTMCLTEPHCGTDLGMLRTKAEPQADG--------SYKVSGTKIFISAGEHD 204

Query: 207 LTENIVHIVLAKIPDENGKLVPGTRGISLFIVPKRMVDTKGKLTGQRNDVALAGLNHKLG 266
           + +NIVHIVLA++PD       GT+GISLFIVPK + + +G + G+RN V+   + HK+G
Sbjct: 205 MADNIVHIVLARLPDAPA----GTKGISLFIVPKFLPNAEGGV-GERNGVSCGSIEHKMG 259

Query: 267 WRGTTNTLLNFGEGKYPVDGKAGAVGYLVGEPGKGLHCMFHMMNEARIGVGTAATMLGMA 326
             G    ++NF            A GYL+G   KGL+CMF  MN AR+G           
Sbjct: 260 IHGNATCVMNFD----------AATGYLIGPANKGLNCMFTFMNTARLGTALQGLAHAEV 309

Query: 327 GYHASLEYAKTRPQGRLVKKPQAAGTAVAKDSAAPQVRIIEHADVRRMLLAQKAYCEGAL 386
            +   L+YA+ R Q R +  P+A       D AA    II H DVRRMLL  KA+ EG  
Sbjct: 310 AFQGGLKYARERLQMRSLTGPKAP------DKAADP--IIVHPDVRRMLLTMKAFAEGNR 361

Query: 387 ALELYCARLVDEQK-TGDAQAADDARLLLEVLTPIAKSWPSEWCLEANSLAIQVHGGYGY 445
           A+  + A+ VD  K + D +    A  LL  LTPIAK++ +E   EA +  +Q++GG+G+
Sbjct: 362 AMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHGF 421

Query: 446 TRDFPVEQYWRDNRLNMIHEGTHGIQAADLLGRKVLMEKGRGLQ-------LLAGRMTAT 498
             ++ +EQ  RD+R++M++EGT GIQA DLLGRKVLM +G  L+                
Sbjct: 422 IAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQAQEGN 481

Query: 499 IASAAKVPALAAHAKALGAALQRIGSATEAAWFTGDPADALANAVPYMQAFGHTVLAWIW 558
            A    V  LAA  K  G    ++G A        D  +  A +V Y+   G+  LA+ W
Sbjct: 482 EAVKEFVEPLAAINKEWGELTMKVGMAA-----MKDREEVGAASVDYLMYSGYACLAYFW 536

Query: 559 LDVARRALEK--DGEKARAVTAGKIGATDYFFHYELPKIGAWLNVVETRDPTCTALPEDA 616
            D+AR A EK   G    A    K+    ++F   LP+    +  + +      A+ E+ 
Sbjct: 537 ADIARLAAEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMDEEH 596

Query: 617 F 617
           F
Sbjct: 597 F 597