Pairwise Alignments

Query, 231 a.a., ABC transporter, ATP-binding protein 2 RSc1754 from Variovorax sp. SCN45

Subject, 231 a.a., Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  215 bits (548), Expect = 5e-61
 Identities = 107/230 (46%), Positives = 156/230 (67%), Gaps = 4/230 (1%)

Query: 1   MLKLKDIHAYYGKSHVLHGVSFDVNPGEIVALLGRNGSGRSTTAKAIMGLVHA-EGGLHW 59
           ML +  IH+YY KSHVL GVS  V  GE+V LLGRNG+G++TT ++I+G+V   +G + +
Sbjct: 1   MLNVDSIHSYYDKSHVLEGVSLKVEAGELVTLLGRNGAGKTTTLRSILGIVRPRQGQISF 60

Query: 60  KGQDILRRKAYEIAHFGIGYVPENRDIFPKLTVHQNLLLGQKGSGKGSRWNFEDMYAMFP 119
            GQ ++ R+ ++IA  GI  VPE+R IF +L+V +NL +  +   K SRW  ED+Y+MFP
Sbjct: 61  NGQQLVGREIFDIARLGIALVPEHRGIFRQLSVEENLKIAVR---KTSRWQLEDVYSMFP 117

Query: 120 RLKERQHTEAGVLSGGEQQMLTLCRTLMGDPDLIIIDEPTEGLAPKIVELVGQYLRTLKD 179
           RLKER+      LSGGEQQML + R L+  P L+I+DEPTEGLAP IV+ + + LR +KD
Sbjct: 118 RLKERRRNGGFALSGGEQQMLAIARALLNGPRLLILDEPTEGLAPVIVDELVKILRRIKD 177

Query: 180 KGISVLLIEQKLTIAMQISDRALVMGHGSIVFDGTPDSLRADATTRKEWL 229
           +G+S+LL+EQ L +   ++DR  V+  G + + G+    R D + +  +L
Sbjct: 178 EGLSILLVEQNLMVCDALADRHYVLEQGRVAYQGSAAQFREDPSIKNRYL 227