Pairwise Alignments

Query, 442 a.a., ABC transporter, permease protein 2 RSc1752 from Variovorax sp. SCN45

Subject, 387 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

 Score = 90.9 bits (224), Expect = 6e-23
 Identities = 81/359 (22%), Positives = 151/359 (42%), Gaps = 62/359 (17%)

Query: 35  LLLIVAPMIFTSSLALTMLSQIG-YLIIICLSYNILL--GQGGMLSFGHAVYVGLGSFIA 91
           LL ++  ++F  +L    L+ +G YL    ++  ++L  G GG+LS G  V+ G+G +  
Sbjct: 19  LLALLILVVFPLTLDAFRLNMVGKYLTYAFVAVGLVLCWGYGGILSLGQGVFFGVGGYCM 78

Query: 92  ----------------------------------------IHAMNFASAGKLPIPLVLIP 111
                                                    H+ +F  A  + +P++L  
Sbjct: 79  AMFLKLEASDPESTKIQSTPGIPDFMDWNQITELPWLWQPFHSFSFTLAAVIAVPVLLAF 138

Query: 112 LVGGLGGMFFAMVFGYVSTKKSGTTFAMITLGLGELVAAMALMFPSFFGGEGGITTNRVY 171
           ++G                +     F+++T  +  ++  + +      GG  GIT  +  
Sbjct: 139 IIG----------MALFKRRVGDVYFSIVTQAIALILTVLIVGQQGLTGGVNGITDLK-- 186

Query: 172 GASFFGINFGPQNQ---VYYLIAVYCFICTGLMFAFTGTPLGRMLNAVRDNPERVEFIGY 228
             +  G +    +    +Y++ A   F C  +      + LGR+L A+RD  ERV F GY
Sbjct: 187 --TLLGWDLRTDSAKMILYFINAGLLFGCIFIGRFILASKLGRLLMAMRDKEERVRFSGY 244

Query: 229 NTQRVRYFAFIIAGFFAGIGGGLAAINFEIVNAADSLNGLRSGSYLLFTFLGGATFFFGP 288
           +    + F F +A  F+ IGG + A+    ++ +  +  + S   ++F  +GG     G 
Sbjct: 245 DVASFKIFVFCVAAAFSAIGGAMFALQVGFMSPS-FVGIVPSIEMVIFAAVGGRMSLLGA 303

Query: 289 IIGAALLVFALVLLSE-LSKAWLLYVGLVFLLMVMFAPGGVASLIMMNVRVALFGKIKR 346
           + GA L+ +     SE   + WL  +G +F+ +VM+ P G+A L   + R AL   ++R
Sbjct: 304 VYGALLVNYGKTYFSESFPELWLYLMGGLFIAVVMYFPNGLAGLWDSHGRQALAKMLRR 362