Pairwise Alignments

Query, 442 a.a., ABC transporter, permease protein 2 RSc1752 from Variovorax sp. SCN45

Subject, 359 a.a., putative Urea ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 6e-26
 Identities = 92/349 (26%), Positives = 161/349 (46%), Gaps = 52/349 (14%)

Query: 22  LNIGRILIWSFFAL----LLIVAPMIFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLS 77
           L IG +++    AL    LL     +  S+  LT++ +I    I+ L+ +++ G  G+LS
Sbjct: 19  LAIGAVVVLLLVALPLCSLLPADHALHVSAYTLTLVGKILCYAIVALALDLVWGYAGLLS 78

Query: 78  FGHAVYVGLGSF-IAIHAMNFASAGKLP----------IP------------LVLIPLVG 114
            GH ++  LG + + ++ M  A+   LP          +P            L L+ L  
Sbjct: 79  LGHGLFFALGGYAMGMYLMRQAAGDGLPGFMTFLSWTELPWYWAGTQHFAWALCLVVLAP 138

Query: 115 GLGGMFFAMVFGYVSTKK--SGTTFAMITLGLGELVAAMALMF--PSFFGGEGGITTNRV 170
           GL     A+VFG+ + +    G  F+++T  L    A M L F   + FGG  G T+ R 
Sbjct: 139 GL----LALVFGWFAFRSRIKGVYFSIMTQAL--TFAGMLLFFRNETGFGGNNGFTSFR- 191

Query: 171 YGASFFGINFGPQNQ--VYYLIAVYCFICT-GLMFAFTGTPLGRMLNAVRDNPERVEFIG 227
              +  G +   Q    V +L+ V   + +  L +  T +  GR+L AVRD   R+ F G
Sbjct: 192 ---TILGFDIAAQGTRAVLFLLTVALLLASLYLCWRLTRSKFGRLLTAVRDAENRMMFCG 248

Query: 228 YNTQRVRYFAFIIAGFFAGIGGGLAAINFEIVNAADSLNGLRSGSYLLFTFLGGATFFFG 287
           Y+ +  +   ++++    G+ G L      I+N ++ ++   S    ++  LGG     G
Sbjct: 249 YDPRGFKLLVWVLSAVLCGLAGALYVPQVGIINPSE-MSPTNSIEAAVWVALGGRGTLIG 307

Query: 288 PIIGAALL----VFALVLLSELSKAWLLYVGLVFLLMVMFAPGGVASLI 332
           P++GA L+     +  V   E    WL ++G +F+L+ ++ P GV  L+
Sbjct: 308 PLLGAGLVNGMKSWFTVAFPEF---WLFFLGALFILVTLYLPKGVVGLL 353