Pairwise Alignments

Query, 442 a.a., ABC transporter, permease protein 2 RSc1752 from Variovorax sp. SCN45

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  125 bits (314), Expect = 2e-33
 Identities = 79/296 (26%), Positives = 147/296 (49%), Gaps = 14/296 (4%)

Query: 37  LIVAPMIFTSSLALTMLSQIGYLIIICLSYNILLGQGGMLSFGHAVYVGLGSFIAIHAMN 96
           L+  P++  S+   T+ ++I    +  L+ N+LLG  G+LSFG  ++ G+G++ A   M 
Sbjct: 25  LVALPLLLPSA---TLATEILIFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMI 81

Query: 97  FASAGKLPIPLVLIPLVGG-LGGMFFAMVFGYVSTKKSGTTFAMITLGLGELVAAMALMF 155
               G      +   L+G  + G F A++ G ++ +++G  F M+TL   ++   +A   
Sbjct: 82  HLQWG------MFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTL 135

Query: 156 PSFFGGEGG---ITTNRVYGASFFGINFGPQNQVYYLIAVYCFICTGLMFAFTGTPLGRM 212
             + GG+ G   +    +  A    ++       Y  +AV   +          +P G  
Sbjct: 136 SGWTGGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGST 195

Query: 213 LNAVRDNPERVEFIGYNTQRVRYFAFIIAGFFAGIGGGLAAINFEIVNAADSLNGLRSGS 272
           L A+R+N  R   IGY+T+  +   F+++G   GI G L A+       ++ ++ + S +
Sbjct: 196 LLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSN-IDLMMSEN 254

Query: 273 YLLFTFLGGATFFFGPIIGAALLVFALVLLSELSKAWLLYVGLVFLLMVMFAPGGV 328
            L+ T +GG    FG ++GA  +V    +LSEL   WL+ +G++ +L+V+F  GG+
Sbjct: 255 ILIMTIVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRGGL 310