Pairwise Alignments

Query, 317 a.a., ABC transporter, permease protein 1 RSc1751 from Variovorax sp. SCN45

Subject, 305 a.a., urea ABC transporter permease from Pseudomonas simiae WCS417

 Score =  117 bits (292), Expect = 5e-31
 Identities = 92/314 (29%), Positives = 150/314 (47%), Gaps = 38/314 (12%)

Query: 12  NGVSYGLLLFMLSSGLTLIFSMMGVLNFAHASFYMLGAYFAFTISGIL-----GFWP--- 63
           NG+S   +L +++ GL +IF  MGV+N AH  F  +GAY  +  S +      GF P   
Sbjct: 17  NGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYTTYVCSSLTAHFAPGFQPYYF 76

Query: 64  --ALVIAPLLVFALGAAFERYCLRRVHKFGHVPELLVTFGLSYLILEIVQLVWGRSTVPY 121
             A+ ++ L+  A+G   E   + R++K   +  LL T+GLS ++ +  + V+G   V  
Sbjct: 77  FFAIALSFLVAGAIGWLVEWAMISRLYK-RPLDTLLATWGLSLVMQQTFRSVFGAREVSA 135

Query: 122 GLPTALQGPLFSLYGTQFPKSRSFIMLVAVLMLVSVWLLLTRTRIGLVIQAALKHPDMVE 181
             P  L G +      + P++  F+M + +L+  +++L+L R+R GL ++A +++  M  
Sbjct: 136 EPPAWLMGSVNFTDAIEIPRNGLFMMALTLLLTAAIFLMLYRSRWGLQVRATVQNRLMSR 195

Query: 182 ALGHNVPRVFMLVFGGGAALAGLAGVVGGNTYVTEPAMAGSVGSIIFVVVVVGGMGSLAG 241
           A+G N  +V  + F  G  +AG+AG        T P          F+VVV GG  SL G
Sbjct: 196 AVGINTRKVDRMTFALGCGVAGVAGAAFTTIGSTGPTAGSQYIVDTFLVVVFGGAQSLFG 255

Query: 242 AFLASLIIGIVQTFAVAMDQSLATGLQALGVAVTDQTFGYELLKLTISQVAPILPYLFLV 301
                    I   F +A  QSL+    +  +A            LT+S V         +
Sbjct: 256 T--------IASAFVIAQTQSLSEFFLSGSMAKV----------LTLSSV---------I 288

Query: 302 LILIFRPKGLLGTR 315
           LIL+ RP+GL   +
Sbjct: 289 LILMLRPQGLFSIK 302