Pairwise Alignments

Query, 410 a.a., ABC transporter, substrate-binding protein RSc1750 from Variovorax sp. SCN45

Subject, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

 Score = 80.1 bits (196), Expect = 1e-19
 Identities = 84/380 (22%), Positives = 152/380 (40%), Gaps = 18/380 (4%)

Query: 6   KIAAAAVIAATATGALAQKGETVKIAWLDPLSGLMAAVGTNQLKTFQFFAEEFNKKNAA- 64
           K+ AA V+A  A  + A   +T+KI    P +G +   G  Q    +    + N K    
Sbjct: 10  KLFAAMVLAGVAGHSFA--ADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGVD 67

Query: 65  GVKFEIIGIDNKLSPQETTSALRSALDQGARYIVQGNGSGPALAIIDALEKNNARNPGKE 124
           G   E    D+   P++  +     ++ G +++V    S       D  E          
Sbjct: 68  GKMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGV------ 121

Query: 125 ALYLNYAAVDPELTNAKCSYWQYRFDADTSMKMEALTTYMKDQPDIKKVYIIGQNYAHGQ 184
            + +  AA  PE+T A+     +R     S +  A   Y+ D    K V ++     +G+
Sbjct: 122 -IMITPAATSPEIT-ARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGE 179

Query: 185 QVSKYAKEDLKHKRPDIQIVGDDLHPLAQVRDFAPYIAKIKASGADTVITGNWGSDLALL 244
            ++   K+ L+ K   + +  + L+  A  +DF+  I K+K +  D V  G +  +L L+
Sbjct: 180 GIATAVKQTLEKKGTKVAVF-EGLN--AGDKDFSSIIQKLKQANVDFVYYGGYHPELGLI 236

Query: 245 IKAANDSGLNVKFYTYYAVTTGTPTAMG-AASDGKVYQVGYAHYNMGGDMQKYAEDFKKK 303
           ++ A + GLN KF     V   + + +   AS+G +  +  + ++     +   E+F K 
Sbjct: 237 LRQAKEKGLNAKFMGPEGVGNDSISQIAQGASEGLLVTLPKS-FDTDPANKAIVEEFAKN 295

Query: 304 FNDDL--YTTDVYTVFQALTEAFVKTKSTDPVKVAAAMEGMKFKSFNGDVELRKTDHQLQ 361
             D    +    Y+  + +       KS D  KVA A+    FK+  GD+          
Sbjct: 296 KQDPTGPFVFPAYSAIEVIAGGIKAAKSEDTAKVAEAIHAGTFKTPTGDLSFDAKGDLKD 355

Query: 362 QGLYIAKWEKASAKYPYSPE 381
               + +W     K   SP+
Sbjct: 356 FKFVVYEWHFGKPKTEVSPQ 375