Pairwise Alignments

Query, 410 a.a., ABC transporter, substrate-binding protein RSc1750 from Variovorax sp. SCN45

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 81/380 (21%), Positives = 152/380 (40%), Gaps = 18/380 (4%)

Query: 6   KIAAAAVIAATATGALAQKGETVKIAWLDPLSGLMAAVGTNQLKTFQFFAEEFNKKNAA- 64
           K+ AA V+A  A+ + A   +T+KI    P +G +   G  Q    +   ++ N      
Sbjct: 6   KLFAAMVLAGVASHSFA--ADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGGVD 63

Query: 65  GVKFEIIGIDNKLSPQETTSALRSALDQGARYIVQGNGSGPALAIIDALEKNNARNPGKE 124
           G   E    D+   P++  +     ++ G +++V    S       D  E          
Sbjct: 64  GKMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGV------ 117

Query: 125 ALYLNYAAVDPELTNAKCSYWQYRFDADTSMKMEALTTYMKDQPDIKKVYIIGQNYAHGQ 184
            + +  AA  PE+T A+     +R     S +  A   Y+ D    K V ++     +G+
Sbjct: 118 -IMITPAATSPEIT-ARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGE 175

Query: 185 QVSKYAKEDLKHKRPDIQIVGDDLHPLAQVRDFAPYIAKIKASGADTVITGNWGSDLALL 244
            ++   K+ L+ K   + +  + L+  A  +DF+  I K+K +  D V  G +  +L L+
Sbjct: 176 GIATAVKQTLESKGTKVAVF-EGLN--AGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLI 232

Query: 245 IKAANDSGLNVKFYTYYAVTTGTPTAMGA-ASDGKVYQVGYAHYNMGGDMQKYAEDFKKK 303
           ++ A + GL  KF     V   + + +   AS+G +  +  + ++     +K  +  K  
Sbjct: 233 LRQAQEKGLKAKFMGPEGVGNDSISQIAQNASEGLLVTLPKS-FDADPANKKIVDAIKAD 291

Query: 304 FNDDL--YTTDVYTVFQALTEAFVKTKSTDPVKVAAAMEGMKFKSFNGDVELRKTDHQLQ 361
             D    +    Y+  + + +   K  S D  KVA A+    FK+  GD+          
Sbjct: 292 GKDPSGPFVFPAYSAVELIAQGIKKAGSDDTDKVAEAIHKGTFKTPTGDLSFDDKGDLKD 351

Query: 362 QGLYIAKWEKASAKYPYSPE 381
               + +W     K   SP+
Sbjct: 352 FKFVVYEWHFGKPKTEVSPQ 371