Pairwise Alignments

Query, 409 a.a., ABC transporter, substrate-binding protein RSc1750 from Variovorax sp. SCN45

Subject, 416 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 90/358 (25%), Positives = 139/358 (38%), Gaps = 39/358 (10%)

Query: 7   SVAACAMLVSFTAAF--------AQKGETVKIAWLDPLSGLMAAV-GTNQLKTTQFLAEE 57
           +V +CA+ V  T A         AQ   T +I  ++  S L + + G   +   Q    +
Sbjct: 9   TVLSCAVAVPITTAHKASAQIASAQDLPTFRIGVMNDQSSLYSDIAGPGSVTAAQMAVAD 68

Query: 58  FNKKNQSGVKFEVIGIDNKLSPQETTAALRSAQD-QGARYIMQGNGSGPALAIIDAIEKN 116
           FN +   G K EV+  D++      ++  R   D      I+    S  ALA+ D     
Sbjct: 69  FNPEKH-GFKVEVVSADHQNKADIGSSVARRWYDLDKVDAIVDVPTSSVALAVADISRDK 127

Query: 117 NSRNPGKELLYMNYAAVDPDLTNSKCS----YWHFRVDADTSMKMEALTTWMKDQADIKK 172
           N        +++  +A   DLT   C+    +W +   A  +    A+   +K   D   
Sbjct: 128 NK-------VFLVASAGTSDLTAKACTPNTVHWTYDTWALANGTARAM---IKQGGD--S 175

Query: 173 VYLLGQNYAHGVQVAKYAKEDLKVKRPDIQIVGEDLHPLAQVRDFSPYIAKIKASGADTV 232
            Y L  +YA G  + + A E +K      +++G  L P  Q  DFS +I + + SGA  V
Sbjct: 176 WYFLTADYAFGHALERDAAEVVKANGG--KVMGRALAPF-QSSDFSSFILQAQGSGAKVV 232

Query: 233 ITGNWGSDLSLLIKAANDSGLN-----VKFLTYYAP--GAGTPTAMGATSDGKVY-TVAY 284
              N G D    +K A + GL+     V  L + +     G  TA G       Y  +  
Sbjct: 233 ALANSGGDTINSVKQAAEFGLSQKQKLVSLLIFLSDIHSLGLKTAQGLMLTNAFYWDLND 292

Query: 285 AHYNMGGEIQQLLNGYKKRMNDDLTQASIYHVFALLDAAFAKTKSTDPVKVAAALEGM 342
                G       NG    MN   T A+  H    + AA  K K+ D   V A ++ M
Sbjct: 293 GTRAFGKAFGARNNGRMPTMNQAGTYAATLHWMKAI-AAMDKAKAHDGAAVVAQMKAM 349