Pairwise Alignments

Query, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  162 bits (411), Expect = 2e-44
 Identities = 153/564 (27%), Positives = 247/564 (43%), Gaps = 56/564 (9%)

Query: 6   QDQPLL---ISSLIEFAERHNGDGEIVSRRVEGDIHRTTWGGIASRARQVANALDGEQLL 62
           QD+PLL   I    +       D E +  R +G   R +W  +A +    A AL    + 
Sbjct: 11  QDRPLLTQTIGQAFDATVARCCDSEALVSRHQG--LRYSWRQLAEQVEIYARALIALGVN 68

Query: 63  FSDRVATLAWNGYRHLELYYGVSGSGRVLHTINPRLHPDQIAWIAN-------------- 108
             DRV   + N  +   L    +  G +L  INP     ++ ++                
Sbjct: 69  TGDRVGIWSPNCAQWCILQLASAKVGAILVNINPAYRVGELEYVLRQSGCRWLVCAEAFK 128

Query: 109 ----HAEDQILCFDLSFLPLVQAVHARCPMIRKWVALC---DADKLP--ADSGVPNLVSY 159
               H   Q L  +L+     +      P +R  ++L     A  LP  A +      S 
Sbjct: 129 TSDYHTMVQELVPELASAAPGELASECLPELRGVISLAANPPAGFLPWHAFAERAGQTSV 188

Query: 160 ETWLG-QQSTDYDWPTFDENSASSMCYTSGTTGNPKAALYSHRSTMLHAYAAALPDVMRI 218
           E     QQS  +D P        ++ YTSGTTG PK A  SH + + + +     + + +
Sbjct: 189 EACTARQQSLQFDQPV-------NIQYTSGTTGAPKGATLSHYNILNNGFMVG--ESLGL 239

Query: 219 SAQDSVLPVVPMFHVNAWGIPYSAALV-GCKLVFPGPSLDGKSVYELIESEGVTFAAGVP 277
           +A+D ++  VP++H     +     +  G  +++P  + D +     +  E  T   GVP
Sbjct: 240 TARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYPNDAFDAELTLRAVAEERATILYGVP 299

Query: 278 TVWQMMLGHMQTNGLKFSKLNRTVIGGSACP-PAMITAFQEKYNVEVLHAWGMTEMSPLG 336
           T++  ML H     +  S L   ++ G+ CP   M     + +  EV  A+GMTE SP+ 
Sbjct: 300 TMFIAMLDHPSRAHMDLSTLRSGIMAGATCPIEVMRRVIDQMHMAEVQIAYGMTETSPVS 359

Query: 337 TLCTLKNKHLSLPADAQLQIRMKQ-GRAIFGVDMKIVDGDGNELPWDGKAYGDLLVKGPW 395
                    L    D  L++R+   GR    ++ K+VD DG  +P      G+L  +G  
Sbjct: 360 ---------LQTGPDDDLELRVTTVGRTQPQLENKLVDADGCIVPRG--EIGELCTRGYS 408

Query: 396 VVKEYFKGEGGDPLIADA-QGRGWFPTGDVATIDADGYLQITDRSKDVIKSGGEWISSID 454
           V+  Y+         ADA    GW  +GD+A +D  GY++I  R+KD+I  GGE I   +
Sbjct: 409 VMLGYWDNPQAT---ADAIDPAGWMHSGDLAVMDEQGYVRIVGRNKDMIIRGGENIYPRE 465

Query: 455 IENIAVAHPAVAMAACIGVFHPKWDERPIIAVVKKPGAEVTREELLKFYEGKTAKWQIPD 514
           +E     HPAVA A  IG+   ++ E  +  +   PG   T EEL  + + + A +++P 
Sbjct: 466 LEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATVEELQGWCKARIAHFKVPR 525

Query: 515 DVVFVEAIPLGATGKILKTRLREL 538
            + FV+  P+  TGK+ K R+RE+
Sbjct: 526 YIRFVDEYPMTVTGKVQKFRMREI 549