Pairwise Alignments

Query, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  227 bits (578), Expect = 1e-63
 Identities = 163/508 (32%), Positives = 255/508 (50%), Gaps = 18/508 (3%)

Query: 39  RTTWGGIASRARQVANALDGEQLLFSDRVATLAWNGYRHLELYYGVSGSGRVLHTINPRL 98
           R  W     R R++A+AL G  +   D VA +  N    LE ++GV  +G VL+T+N RL
Sbjct: 43  RRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRL 102

Query: 99  HPDQIAWIANHAEDQILCFDLSFLPLVQAVHARCPMIRKWVALCDADKLPADSG-VPNLV 157
             + IA++  H E ++L  D  F  +++   A   ++     + D D      G   + +
Sbjct: 103 DAEAIAFMLQHGEAKVLITDREFHAVIEGALA---LLEHPPLVVDVDDPEYGEGRAVSQL 159

Query: 158 SYETWLGQQSTDY--DWPTFDENSASSMCYTSGTTGNPKAALYSHRSTMLHAYAAALPDV 215
            YE  L +   ++  +WP  DE  A S+ YTSGTTGNPK  +Y HR   L+A    +   
Sbjct: 160 DYEALLNEGDPEFAWEWPD-DEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWA 218

Query: 216 MRISAQDSVLPVVPMFHVNAWGIPYSAALVGCKLVFPGPSLDGKSVYELIESEGVTFAAG 275
           M    +   L  +PMFH N W  P++   +    VF    +D + +  LI    V+   G
Sbjct: 219 M--GHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLR-RVDPQKILTLIREHKVSHLCG 275

Query: 276 VPTVWQMMLGHMQTNGLKFSKLNRTVIGGSACPPAMITAFQEKYNVEVLHAWGMTEMSPL 335
            P V   ++   +          + ++ G+A PPA +    E+  ++V H +G+TE+   
Sbjct: 276 APIVLNALVNMPEAAKAAIEHPVQAMVAGAA-PPAKVIGAVEQMGIKVTHTYGLTEVYGP 334

Query: 336 GTLCTLKNKHLSLPADAQLQIRMKQGRAIFGVD-MKIVDGDGNE-LPWDGKAYGDLLVKG 393
            T+C   ++  +L  + + +I+ +QG     +D + + D    + +P DG   G++ ++G
Sbjct: 335 VTVCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRG 394

Query: 394 PWVVKEYFKGEGGDPLIADAQGRGWFPTGDVATIDADGYLQITDRSKDVIKSGGEWISSI 453
             V+K Y K        A+A   GWF TGD+A   ADGY++I DR KD+I SGGE IS+I
Sbjct: 395 NTVMKGYLKNPEAT---AEAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTI 451

Query: 454 DIENIAVAHPAVAMAACIGVFHPKWDERPIIAVVKKPGAEVTRE-ELLKFYEGKTAKWQI 512
           ++E+    H AV  AA +     KW E P   V  KPG E TRE ++  +     A +++
Sbjct: 452 EVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGREDTREADITSWCREHLAGFKV 511

Query: 513 PDDVVFVEAIPLGATGKILKTRLRELLK 540
           P  VVF E +P  +TGKI K  LR+  K
Sbjct: 512 PKTVVFGE-LPKTSTGKIQKYVLRDRAK 538