Pairwise Alignments

Query, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  164 bits (414), Expect = 1e-44
 Identities = 146/535 (27%), Positives = 231/535 (43%), Gaps = 43/535 (8%)

Query: 39  RTTWGGIASRARQVANALDGEQLLFSDRVATLAWNGYRHLELYYGVSGSGRVLHTINPRL 98
           R TW  +A    Q A AL    +   DR+   A N        +  +  G +L  INP  
Sbjct: 45  RYTWRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAY 104

Query: 99  HPDQIAWIANHAEDQ-ILCFDL----SFLPLVQAVHARCPMIRKWVALCDADKLPADSGV 153
              ++ +    +  + ++C D      +  ++Q +       +    +C+  + P   GV
Sbjct: 105 RSSELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASSQPGALICE--RFPELRGV 162

Query: 154 PNLV-----SYETW--LGQQSTDYDWPTFDENSASSMC-------YTSGTTGNPKAALYS 199
            +L       +  W  L  ++            A   C       YTSGTTG PK A  S
Sbjct: 163 VSLALSPPPGFLAWHALQARAEVVSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLS 222

Query: 200 HRSTMLHAYAAALPDVMRISAQDSVLPVVPMFHVNAWGIPYSAALV-GCKLVFPGPSLDG 258
           H + + + Y     + + ++  D ++  VP++H     +     +  G  L++P  + D 
Sbjct: 223 HSNILNNGYMVG--ESLGLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDP 280

Query: 259 KSVYELIESEGVTFAAGVPTVWQMMLGHMQTNGLKFSKLNRTVIGGSACP-PAMITAFQE 317
            +    +  E  T   GVPT++   L H Q      S L   ++ G+ CP   M     E
Sbjct: 281 LATLRAVAQEKATALYGVPTMFIAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGE 340

Query: 318 KYNVEVLHAWGMTEMSPLGTLCTLKNKHLSLPADAQLQIRMKQ-GRAIFGVDMKIVDGDG 376
            +  EV  A+GMTE SP+          L   A   L+ R+   GR    ++ K+VD +G
Sbjct: 341 MHMAEVQIAYGMTETSPVS---------LQTGAADDLERRVTSVGRTQPRLESKVVDAEG 391

Query: 377 NELPWDGKAYGDLLVKGPWVVKEYFKGEGGDPLIADAQGRGWFPTGDVATIDADGYLQIT 436
           N +P      G+L  +G  V+  Y+          DA+G  W  TGD+A +D  GY++I 
Sbjct: 392 NTVPRG--EIGELCTRGYSVMLGYWNNPKATAESIDAEG--WMHTGDLAVMDEQGYVRIV 447

Query: 437 DRSKDVIKSGGEWISSIDIENIAVAHPAVAMAACIGVFHPKWDERPIIAVVKKPGAEVTR 496
            RSKD+I  GGE I   ++E     HPAVA    IGV   K+ E  +  V   PG  V+ 
Sbjct: 448 GRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSE 507

Query: 497 EELLKFYEGKTAKWQIPDDVVFVEAIPLGATGKILKTRLREL----LKDYKLPTL 547
            EL ++   + A +++P    FV+  P+  TGK+ K R+RE+    LK   LP +
Sbjct: 508 VELREWARARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISVEELKATALPKI 562