Pairwise Alignments

Query, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  211 bits (538), Expect = 4e-59
 Identities = 162/508 (31%), Positives = 243/508 (47%), Gaps = 27/508 (5%)

Query: 39  RTTWGGIASRARQVANALDGEQLLFSDRVATLAWNGYRHLELYYGVSGSGRVLHTINPRL 98
           R ++  +  R+R +A+AL+   +   +RVA LA N    LE +YGV G+G VL  IN RL
Sbjct: 45  RYSYRQLHERSRALASALERVGVQPGERVAILAPNIPEMLEAHYGVPGAGAVLVCINIRL 104

Query: 99  HPDQIAWIANHAEDQILCFDLSFLPLVQAVHARCPMIRKWVALCDADKLPADSGVPNLVS 158
               IA+I  H   ++L  D  F  +     A        V + D     AD  + + + 
Sbjct: 105 EGRSIAFILRHCAAKVLICDREFGAVANQALAMLDAPPLLVGIDDDQAERAD--LAHDLD 162

Query: 159 YETWLGQ-------QSTDYDWPTFDENSASSMCYTSGTTGNPKAALYSHRSTMLHAYAAA 211
           YE +L Q        +   +W +   N      YTSGTTG+PK  +  HR   L+A A A
Sbjct: 163 YEAFLAQGDPARPLSAPQNEWQSIAIN------YTSGTTGDPKGVVLHHRGAYLNACAGA 216

Query: 212 LPDVMRISAQDSVLPVVPMFHVNAWGIPYSAALVGCKLVFPGPSLDGKSVYELIESEGVT 271
           L  + ++  +   L  +PMFH N W   ++  L G   V     +   ++   I    VT
Sbjct: 217 L--IFQLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLR-KVQPDAINAAIAEHAVT 273

Query: 272 FAAGVPTVWQMMLGHMQTNGLKFSKLNRTVIGGSACPPAMITAFQEKYNVEVLHAWGMTE 331
             +  P V  M++     +      +  +VI G A PP+ + A  E     + HA+GMTE
Sbjct: 274 HLSAAPVVMSMLIHAEHASA---PPVPVSVITGGAAPPSAVIAAMEARGFNITHAYGMTE 330

Query: 332 MSPLGTLCTLKNKHLSLPADAQLQIRMKQGRAI-FGVDMKIVDGD-GNELPWDGKAYGDL 389
                TLC  +     LP +A+ Q   +QG A     +  ++D D G  +P DG   G+L
Sbjct: 331 SYGPSTLCLWQPGVDELPLEARAQFMSRQGVAHPLLEEATVLDTDTGRPVPADGLTLGEL 390

Query: 390 LVKGPWVVKEYFKGEGGDPLIADAQGRGWFPTGDVATIDADGYLQITDRSKDVIKSGGEW 449
           +V+G  V+K Y            A   GW  TGD+A +  DGY++I DR+KD+I SGGE 
Sbjct: 391 VVRGNTVMKGYLHNPEATRA---ALANGWLHTGDLAVLHLDGYVEIKDRAKDIIISGGEN 447

Query: 450 ISSIDIENIAVAHPAVAMAACIGVFHPKWDERPIIAVVKKPGAEVTREELLKFYEGKTAK 509
           ISS++IE +   HP V  AA +     +W E P   V  +  A  + ++L+++   + A 
Sbjct: 448 ISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVTLRADALASGDDLVRWCRERLAH 507

Query: 510 WQIPDDVVFVEAIPLGATGKILKTRLRE 537
           ++ P  V  V+ +P  ATGKI K  LRE
Sbjct: 508 FKAPRHVSLVD-LPKTATGKIQKFVLRE 534