Pairwise Alignments

Query, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

 Score =  152 bits (385), Expect = 2e-41
 Identities = 130/501 (25%), Positives = 228/501 (45%), Gaps = 23/501 (4%)

Query: 39  RTTWGGIASRARQVANALDGEQLLFSDRVATLAWNGYRHLELYYGVSGSGRVLHTINPRL 98
           R T+  +  RA Q+A+AL  + +   + VA LA N    +E       +G V   +N RL
Sbjct: 26  RLTFAQLEQRANQLASALLAQGIATGEHVAILAPNRAELVEAEVAFYKAGLVKVPVNARL 85

Query: 99  HPDQIAWIANHAEDQILCFDLSFLPLVQAVHARCPMIRKWVALCDADKLPADSGVPNLVS 158
            PD++  + N A    L  D      + A     P +R  V L +             ++
Sbjct: 86  APDEVIQVLNDACSVALIADAQLAQALLARRQEVPALRLIVTLGERG---------GDIT 136

Query: 159 YETWLGQQSTDYDWPTFDENSASSMCYTSGTTGNPKAALYS--HRSTMLHAYAAALPDVM 216
           Y   L Q S+        +++ + + YTSG++G  KAA+ S  +R  ++    A+     
Sbjct: 137 YAALLAQGSSQPISCDLPDDALAVLHYTSGSSGVLKAAMLSVGNRKALIRKSLAS--PTR 194

Query: 217 RISAQDSVLPVVPMFHVNAWGIPYSAALVGCKLVFPGPSLDGKSVYELIESEGVTFAAGV 276
           R +  D +  V P+ H +   +    A+  C L+      D + + E I+ EGVT    V
Sbjct: 195 RAAPGDVMAHVGPITHASGMQLMPLLAVGACNLLLE--RYDDQLLLETIQREGVTRLFLV 252

Query: 277 PTVWQMMLGHMQTNGLKFSKLNRTVIGGSACPPAMITAFQEKYNVEVLHAWGMTEMSPLG 336
           P +   ++          S L   + G +   PA++    E +   +   +G  E   L 
Sbjct: 253 PAMINRLVNFPDVERYDLSSLRLVMYGAAPMAPALVKRAIEVFGPILAQGYGAGETCSLV 312

Query: 337 TLCTLKNKHLSLPADAQLQIRMKQGRAIFGVDMKIVDGDGNELPWDGKAYGDLLVKGPWV 396
           T+ T +  HL    D +       GR  F  D+++V+    ++   G+  G+++VKGP +
Sbjct: 313 TVLT-EQDHLCEGGDYRRLASC--GRCYFETDLRVVNDHFQDVQ-PGEV-GEIVVKGPDI 367

Query: 397 VKEYFKGEGGDPLIADAQGRGWFPTGDVATIDADGYLQITDRSKDVIKSGGEWISSIDIE 456
           ++ Y++      L A+    G++ TGD+AT+D  GY+ I DR K++I SGG  I   ++E
Sbjct: 368 MQGYWRAPH---LTAEVMRDGYYLTGDLATVDEQGYVFIVDRKKEMIISGGFNIYPSEVE 424

Query: 457 NIAVAHPAVAMAACIGVFHPKWDERPIIAVVKKPGAEVTREELLKFYEGKTAKWQIPDDV 516
            +  + P V  AA +GV   +W E     +V KPG  +  +++++      A ++ P  V
Sbjct: 425 QVLYSMPQVFEAAVVGVPDEQWGEAVRAVIVLKPGMALQEQDVIEHCAQALAGFKKPRAV 484

Query: 517 VFVEAIPLGATGKILKTRLRE 537
            FV  +P    GK+++  +R+
Sbjct: 485 DFVSELPKNPNGKVVRRLIRD 505