Pairwise Alignments

Query, 359 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 17/314 (5%)

Query: 45  LLNEAGFDPDSLHRQNARIPVDEITVLWQFAVARAGRPTLGLH-RDLASTHSKLGTVGHA 103
           LL  AG   + LH   AR+  +    LW+    R       +  R L S    L  +  A
Sbjct: 29  LLARAGIAVEQLHLPEARVSAESYARLWRLLARRCNDEFFAMDTRGLCS--GSLAFMCRA 86

Query: 104 MACSPDLQGALTRVARYMAVISDATAFSLQPEARGCWMVMKHTGGKLPIPRQRVEYALLT 163
               P L   L     +++++      SL  +     +V+     +   PR+   Y    
Sbjct: 87  SMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQQGLAEIVINEPRDE---PRRAFTYFTFW 143

Query: 164 VLMQ---CQWLARRELQPLAMEFVYPAPPDARLHREAFGCEVRFNASANRLLLSDADMTT 220
           +++    C WLA R +  L+++     PP    +R  F   + F     R++++   +  
Sbjct: 144 MIVHGVTC-WLAGRRIPILSIDLRCAEPPFCDDYRVMFSENLHFERPRTRMIIASQYLDL 202

Query: 221 PLPTYHQTLGEMQEHLLDDQLTLLGQTRTSSL----VCAEIARRLPHGEPRRQDVASDLG 276
           PL    +   E+Q  L +    +L + R  +     +  ++ R  P   P    +A  L 
Sbjct: 203 PLRRSEE---ELQRFLAEAPGNILVKYRDPASLGRRIRTDLLRLAPEQWPDADRLARQLC 259

Query: 277 LAERTLQRRLQEESVSFQALLDRTRRELAQEYLAEDRHTLTDVADMLGFVDTSNFFRACK 336
           L+  TL+RRL EE  ++Q L D  RRELA  +L+++   + ++A+ LGF D+S+F++A +
Sbjct: 260 LSPSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMGELAERLGFADSSSFYKAFR 319

Query: 337 RWFGVPPAQYRARI 350
           +WFG  P  YRA I
Sbjct: 320 KWFGCNPGHYRALI 333