Pairwise Alignments

Query, 323 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 65/222 (29%), Positives = 93/222 (41%), Gaps = 28/222 (12%)

Query: 71  DVTTRNFPNGPDLNEAFISGALDVGIYGDTPAIVARSRGLESQLIGFDAVGM--NVWLLT 128
           D+    FP    L EA  +GA+D GI GD P +   + G   + I  D         L+ 
Sbjct: 53  DIRWAEFPAAAPLAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVR 112

Query: 129 PRNGARSVKELDGKSIGVARGSYMHRYVLGLLKEHGL-QKSVKVIHMFPRDGEAALDQGS 187
           P    RS  EL GK I   RGS  H   L  L + GL +K V+   + P D + AL  GS
Sbjct: 113 PEAPLRSAAELKGKRIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGS 172

Query: 188 IAAFAAQIDVGPL--LASRGYPVIDEAEQHPTLRGTSVIVASSKLLAAAPGVPAAWTRAR 245
           + A++       L  L+ +G  +++         G S + A+ K L   PG        R
Sbjct: 173 VDAWSTWEPYTALAELSGQGRVLVN---GRGLSTGNSFLAATDKAL-EEPG--------R 220

Query: 246 RTALQEIRRDNAA-----------YYAFHAEVSGFPLDVVKV 276
           R ALQ+     AA           Y    A + GFP++  ++
Sbjct: 221 RAALQDYLNRLAAAQVWANQHLDTYSKTLAAIIGFPVEAARL 262