Pairwise Alignments

Query, 323 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 79/324 (24%), Positives = 142/324 (43%), Gaps = 27/324 (8%)

Query: 10  LLRGAIAVAGASALPLFSIAQGSGQVLRLGYIGPGKKPANATGWALRQGHLQRELAALGF 69
           L RG +A+  A+A+   +I Q   + LR+GY   G            +G L++ LA  G 
Sbjct: 6   LRRGLVALF-AAAVSFGAITQAQAESLRIGYQKYGTLVLLKA-----KGTLEKRLAEQGV 59

Query: 70  SDVTTRNFPNGPDLNEAFISGALDVGIYGDTPAIVARSRGLESQLIGFD--AVGMNVWLL 127
             V    FP GP L E    G++D G+ G+TP + A++ G +   + ++  A      L+
Sbjct: 60  Q-VQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILV 118

Query: 128 TPRNGARSVKELDGKSIGVARGSYMHRYVLGLLKEHGLQKS-VKVIHMFPRDGEAALDQG 186
              +  +SVK+L GK + + +GS +H  ++  L++ GL+ S ++ +++ P D  AA ++G
Sbjct: 119 PKGSPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYLPPADARAAFERG 178

Query: 187 SIAAFAAQIDVGPLLASRGYPVIDEAEQHPTLRGTSVIVASSKLLAAAPGVPAAWTRARR 246
           S+ A+   +   P  A+      ++  Q  TLR    +V + +   A             
Sbjct: 179 SVDAW---VIWDPYQAA-----AEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVIN 230

Query: 247 TALQEIRRDNAAYYAFHAEVS-------GFPLDVVKVSHPLSQFPEAAYPAEGLALLDEV 299
           T ++E+R       A   EV+       G P  +   S     +  A    E +A   ++
Sbjct: 231 TVIEEVRAVGEWSQANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKI 290

Query: 300 KKFLLAENLVSRDFALAQ--WRAP 321
                A  L+ +  ++    W  P
Sbjct: 291 ADTFQALKLIPKPLSIKDVIWTPP 314