Pairwise Alignments

Query, 466 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  249 bits (637), Expect = 3e-70
 Identities = 149/423 (35%), Positives = 225/423 (53%), Gaps = 14/423 (3%)

Query: 12   SHYDGSARLPPDEVLRPLMDDWARAGKR---LAAVCYLDVDRFAELNDRLGMVAGNAALE 68
            +++D    LP   +L   +       KR     A+ +LD+D F  +ND LG   G+  L+
Sbjct: 661  AYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLK 720

Query: 69   EVARRIKAQLPRESVMARVGGDEFAAVFAGLG------TSQCAQVLERIQNALAEPWTWR 122
             V  R++A +  E  +AR+GGDEF  + +GL       ++Q  ++ + ++  L+EP    
Sbjct: 721  IVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELADTLRELLSEPMFLD 780

Query: 123  DQTASIDASIGAMMLDSNGPPPEIALRQAQHAAFFAKRAADGKVHYFDAPQARADEQVVR 182
                 +  SIG  ++  +G  P   L++A  A + AK +       F     +   + +R
Sbjct: 781  GHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQMFHNSMQKTASERLR 840

Query: 183  ERQRIQEGLLQGEFFLVYQPKVDMRRGEVVGVEALIRWQHPERGLLPPIQFVPLIEDDAL 242
                ++  L +GEF + YQP+VD R   +VG EAL+RWQHP+ G   P +F+ ++ED  L
Sbjct: 841  METDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQSPSEFIKVLEDSGL 900

Query: 243  VEQVGDWAIATALWQAHQWRLAGL----QVSVSVNVAPRHMMRWDFVDRLARHLSQFPKL 298
            + +VG W +  A     Q    GL      S+ VN++PR   + DFV+R+ R L Q  KL
Sbjct: 901  ILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFVERVERSLKQH-KL 959

Query: 299  GAGMLELEILETTAISQFANVALFVEACKALGVGVTIDDFGTGYSSLTYLRQLPVSAVKI 358
               +L+LEI E   I    +    +   K LGV   +DDFGTGYSSLTYL++LPV A+KI
Sbjct: 960  PFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDALKI 1019

Query: 359  DQSFVRGMLDNAQDRAIVQGILALLHALGLTAVAEGVETVKQGEALLAMGCTLAQGYGIA 418
            DQSFVR    +  D  I++ I+A+  +L L  +AEGVET  Q   L  +GC L QGY  +
Sbjct: 1020 DQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQGLGCHLYQGYLHS 1079

Query: 419  MPM 421
             P+
Sbjct: 1080 RPL 1082