Pairwise Alignments

Query, 466 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score =  239 bits (610), Expect = 3e-67
 Identities = 145/423 (34%), Positives = 222/423 (52%), Gaps = 14/423 (3%)

Query: 12   SHYDGSARLPPDEVLRPLMDDWARAGKR---LAAVCYLDVDRFAELNDRLGMVAGNAALE 68
            +++D    LP   +L   +       KR     A+ +LD+D F  +ND LG   G+  L+
Sbjct: 661  AYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLK 720

Query: 69   EVARRIKAQLPRESVMARVGGDEFAAVFAGLGTSQ------CAQVLERIQNALAEPWTWR 122
             +  R++A +  E  +AR+GGDEF  + +GL  S+        ++ + ++  LAEP +  
Sbjct: 721  IITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEPMSLD 780

Query: 123  DQTASIDASIGAMMLDSNGPPPEIALRQAQHAAFFAKRAADGKVHYFDAPQARADEQVVR 182
             Q   +  SIG  ++  +G  P   L++A  A + AK +       F     +A  + +R
Sbjct: 781  GQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQKAASERLR 840

Query: 183  ERQRIQEGLLQGEFFLVYQPKVDMRRGEVVGVEALIRWQHPERGLLPPIQFVPLIEDDAL 242
                ++  L +GE  L +QP+VD R   +VG E L+RW HP+ G  PP QF+ ++E+  L
Sbjct: 841  MENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQVLEESGL 900

Query: 243  VEQVGDWAIATALWQAHQWRLAGL----QVSVSVNVAPRHMMRWDFVDRLARHLSQFPKL 298
            + +VG W +  A     +    GL      ++ VN++PR   + DFV R+ R L  + +L
Sbjct: 901  ILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRSLDDY-RL 959

Query: 299  GAGMLELEILETTAISQFANVALFVEACKALGVGVTIDDFGTGYSSLTYLRQLPVSAVKI 358
               ML LEI E   I    +    +   K  GV   +DDFGTGYSSLTYL++LPV A+KI
Sbjct: 960  PRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDALKI 1019

Query: 359  DQSFVRGMLDNAQDRAIVQGILALLHALGLTAVAEGVETVKQGEALLAMGCTLAQGYGIA 418
            DQSFVR    +  D  IV+ I+A+  +L L  +AEGVE  +Q   L  +GC L QGY  +
Sbjct: 1020 DQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGYLHS 1079

Query: 419  MPM 421
             P+
Sbjct: 1080 RPL 1082