Pairwise Alignments

Query, 466 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  240 bits (612), Expect = 2e-67
 Identities = 142/421 (33%), Positives = 220/421 (52%), Gaps = 10/421 (2%)

Query: 12   SHYDGSARLPPDEVLRPLMDDWARAGKRLAA---VCYLDVDRFAELNDRLGMVAGNAALE 68
            ++YD    LP   + +  + +  +  +R  A   + +LD+DRF  +ND LG  AG+  L+
Sbjct: 841  AYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLK 900

Query: 69   EVARRIKAQLPRESVMARVGGDEFAAVFAGLGTSQCA-----QVLERIQNALAEPWTWRD 123
            ++A R+ A +  +  +AR+GGDEF  +     T + A      V E I  +L  P+   +
Sbjct: 901  DMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLEN 960

Query: 124  QTASIDASIGAMMLDSNGPPPEIALRQAQHAAFFAKRAADGKVHYFDAPQARADEQVVRE 183
            +   + ASIG  +   +G      ++ A  A + AK        ++ A    +  + +  
Sbjct: 961  REFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLEL 1020

Query: 184  RQRIQEGLLQGEFFLVYQPKVDMRRGEVVGVEALIRWQHPERGLLPPIQFVPLIEDDALV 243
               ++  + Q EF L YQP+       + G EAL+RW+HP RGL+PP  F+P+IE+  LV
Sbjct: 1021 ESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFIPVIEELGLV 1080

Query: 244  EQVGDWAIATALWQAHQWRLAGLQV-SVSVNVAPRHMMRWDFVDRLARHLSQFPKLGAGM 302
              VGDW +  A  Q   W  A ++V  VSVN++ R         R+A  L +   L    
Sbjct: 1081 VDVGDWVLREASRQLKAWHKAKVRVPKVSVNISARQFSDGQLGTRIANILEE-SGLPPAC 1139

Query: 303  LELEILETTAISQFANVALFVEACKALGVGVTIDDFGTGYSSLTYLRQLPVSAVKIDQSF 362
            LELE+ E+  + +       + + K LG+ + +DDFGTGYSSL YL+Q P+  +KID++F
Sbjct: 1140 LELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRTF 1199

Query: 363  VRGMLDNAQDRAIVQGILALLHALGLTAVAEGVETVKQGEALLAMGCTLAQGYGIAMPMA 422
            V G+ +  QD  I + I+A+ H+L L  +AEGVET +Q E L   GC   QGY    PM 
Sbjct: 1200 VDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHGCDEVQGYLFGRPMP 1259

Query: 423  A 423
            A
Sbjct: 1260 A 1260