Pairwise Alignments

Query, 351 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  111 bits (277), Expect = 3e-29
 Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 10/206 (4%)

Query: 144 GLPLTIGLAVVGLALAFPLALLLALGRRSGWPVVRTLSASYIELVRGVPLISVLFMASFL 203
           GL  T+ L+VV   L   + L   L R S  P +R LS  Y+ELVRG PL+  +F+  F 
Sbjct: 120 GLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFF 179

Query: 204 LPLLWPAGWQPDVLVRVLAGLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQR 263
           +  +     +       +A L+LF  AY+AEI+R G+Q++ RGQ E A +LG       R
Sbjct: 180 IGTVLNLSRE----FAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMR 235

Query: 264 DIVLPQALRLVVPALTNSVVGTLKDTSLVTVVGLFELTGALGLALGGDPTWRPFYLEGYL 323
            +VLPQA + V+P L    +  +KDTSLV+V+ + EL     L  G +     F     L
Sbjct: 236 HVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITEL-----LKSGREVITTSFSPFEIL 290

Query: 324 F-IAAVYWVLCFGLSRYSVWLEKRLS 348
           F +A +Y ++   LS+ +  LE+RL+
Sbjct: 291 FCVAGLYLLINLPLSKMASRLERRLA 316