Pairwise Alignments

Query, 351 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  112 bits (279), Expect = 2e-29
 Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 8/205 (3%)

Query: 144 GLPLTIGLAVVGLALAFPLALLLALGRRSGWPVVRTLSASYIELVRGVPLISVLFMASFL 203
           GL  T+ ++VV  AL   + L   L R S  P +R LS  Y+ELVRG PL+  +F+  F 
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 204 LPLLWPAGWQPDVLVRVLAGLTLFVAAYLAEIIRGGLQAVPRGQTEVAMALGFGRWPVQR 263
           +  +     +       +A L LF  AY+AEI+R G+Q++ +GQ E A +LG       R
Sbjct: 181 IGTVLNLSRE----FAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMR 236

Query: 264 DIVLPQALRLVVPALTNSVVGTLKDTSLVTVVGLFELTGALGLALGGDPTWRPFYLEGYL 323
            ++LPQA + V+P L    +  +KDTSLV+V+ + ELT +   A+    T      E + 
Sbjct: 237 HVILPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAI----TTSFSTFEIWF 292

Query: 324 FIAAVYWVLCFGLSRYSVWLEKRLS 348
            +A +Y ++   LS  +  LE+RL+
Sbjct: 293 CVAGLYLLINLPLSHIASRLERRLA 317