Pairwise Alignments

Query, 335 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  110 bits (276), Expect = 4e-29
 Identities = 75/249 (30%), Positives = 122/249 (48%), Gaps = 52/249 (20%)

Query: 82  GLINTVRAAVPAAIFSVVLGTLIGIGRLAPHVLLRGICTAYVELLRNVPLLVQLLMLAFA 141
           GL  T+  +V + I  +++G   G+ RL+ +  LR + T YVEL+R  PLLVQ+ +  F 
Sbjct: 120 GLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFF 179

Query: 142 MANLLPDPTEPVHLLPGVWLSKGGLSVPWPVAAEGGWWPTHFEWPERGNFGVSGGAALSP 201
           +  +L                                                    LS 
Sbjct: 180 IGTVLN---------------------------------------------------LSR 188

Query: 202 EYVTIVAGLTFYSAAFVAEIVRAGILSVSQGQVLAGQALGLSSGQQLRIVILPQALRVIV 261
           E+  I A L+ ++ A+VAEIVRAG+ S+++GQ  A ++LGLS+ Q +R V+LPQA + ++
Sbjct: 189 EFAGIAA-LSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMRHVVLPQAFKRVL 247

Query: 262 PSLTNQLLSLTKNSSLAVAVGYPELVSVANTTIGSNGRAFECIAIIMAVYLLLSLLISFG 321
           P L  Q +SL K++SL   +   EL+      I ++   FE +  +  +YLL++L +S  
Sbjct: 248 PPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYLLINLPLSKM 307

Query: 322 MNRYNARVA 330
            +R   R+A
Sbjct: 308 ASRLERRLA 316