Pairwise Alignments

Query, 335 a.a., Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  109 bits (272), Expect = 1e-28
 Identities = 76/249 (30%), Positives = 119/249 (47%), Gaps = 52/249 (20%)

Query: 82  GLINTVRAAVPAAIFSVVLGTLIGIGRLAPHVLLRGICTAYVELLRNVPLLVQLLMLAFA 141
           GL  T+  +V +    +V+G   G+ RL+ +  LR + T YVEL+R  PLLVQ+ +  F 
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 142 MANLLPDPTEPVHLLPGVWLSKGGLSVPWPVAAEGGWWPTHFEWPERGNFGVSGGAALSP 201
           +  +L                                                    LS 
Sbjct: 181 IGTVLN---------------------------------------------------LSR 189

Query: 202 EYVTIVAGLTFYSAAFVAEIVRAGILSVSQGQVLAGQALGLSSGQQLRIVILPQALRVIV 261
           E+   VA L  ++ A+VAEIVRAG+ S+++GQ  A ++LGL++GQ +R VILPQA + ++
Sbjct: 190 EFAG-VAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRHVILPQAFKRVL 248

Query: 262 PSLTNQLLSLTKNSSLAVAVGYPELVSVANTTIGSNGRAFECIAIIMAVYLLLSLLISFG 321
           P L  Q +SL K++SL   +   EL       I ++   FE    +  +YLL++L +S  
Sbjct: 249 PPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYLLINLPLSHI 308

Query: 322 MNRYNARVA 330
            +R   R+A
Sbjct: 309 ASRLERRLA 317