Pairwise Alignments

Query, 385 a.a., Macrolide-specific efflux protein MacA from Variovorax sp. SCN45

Subject, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  247 bits (631), Expect = 4e-70
 Identities = 147/382 (38%), Positives = 217/382 (56%), Gaps = 22/382 (5%)

Query: 10  RKYFIGILVLVVLG-LVAFVGLSPARKPEYLTASVQRTDLENAVLATGVLQALKQVEVGA 68
           R+  +G L L+ LG L+A+  L    +P   T +V R D+E++V A G LQ  + V+VGA
Sbjct: 9   RRLLLGGLGLLGLGSLLAWTSLPFGAQP-VSTVAVTRADIESSVTALGTLQPRRYVDVGA 67

Query: 69  QVSGQLKSLKVVLGQTVKKGDWLAEIDPVISQNTLAQEQAKLDNLQAQKLAKEVRIRQAQ 128
           Q SGQ+++L V +G  V KG  L EIDP   Q  L   +  +DNL+AQ   +  +++ AQ
Sbjct: 68  QASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKAQLAEQRAQLKLAQ 127

Query: 129 LSWTRQQEMLAQDAAAKQDMESADAELRALRADGVSLDAQIRQQRLALASAQTNLSYTRI 188
               RQ+++ A  A  ++D+++A+A+L   +A      AQIRQ   +L S +  L YTRI
Sbjct: 128 QQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQANASLRSDEAELGYTRI 187

Query: 189 VAPIDGDVVSISTLEGQTVVASFQVPTLMKLADLSTMTVKAQVSEADVVRVKAGQPVYFT 248
            AP+DG VV++   EGQT+ A  Q P ++++A LS MTV AQVSEAD+ +++ G   YFT
Sbjct: 188 FAPMDGTVVAVDAREGQTLNAQQQTPLILRIAKLSPMTVWAQVSEADIGKIQPGMTAYFT 247

Query: 249 ILGDPDKRYYGTLRAVQPSPEKI--------------------NNAVFFNALFDVPNPDR 288
            L    +R+  T+R V P P K                     +  V +  L DV NPD 
Sbjct: 248 TLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYTVLLDVDNPDG 307

Query: 289 TLRVDMTAQVAIMLGEAKQALVVPLTALGTRDKDGRQEVRVLKADQSVEKRMVRVGISNN 348
            L  +MT QV  ++G+A Q L  PL AL   D +G +  +V   D  VE+R VR G+S+ 
Sbjct: 308 ALMAEMTTQVFFVVGQASQVLSAPLAALDDSDNEGLRLAQVFGRDGKVEQRKVRTGLSDR 367

Query: 349 FQAQVLEGLKEGDKVITGDASA 370
            + Q+L+GL EGD+++ G  +A
Sbjct: 368 LRVQILDGLSEGDRLVIGAPAA 389