Pairwise Alignments

Query, 385 a.a., Macrolide-specific efflux protein MacA from Variovorax sp. SCN45

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  101 bits (252), Expect = 4e-26
 Identities = 101/400 (25%), Positives = 173/400 (43%), Gaps = 56/400 (14%)

Query: 1   MPNTQPRRSRKYFIGILVLVVLGLVAFVGLSPARKPEYLTAS------------------ 42
           M  +  R  R++ +G+L+L+++  +A+  L PA  P +  A                   
Sbjct: 1   MQASNSRSLRRWLVGLLILLLVAALAW-WLWPAATPAHKEAGGVRGGKGMGMIGGRPGFG 59

Query: 43  ------------VQRTDLENAVLATGVLQALKQVEVGAQVSGQLKSLKVVLGQTVKKGDW 90
                       V+  D      A G + A   V V ++V+G+L  +    GQ VK GD 
Sbjct: 60  GSSDPVPVRVVPVRIGDFPLYYKALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDL 119

Query: 91  LAEIDPVISQNTLAQEQAKLDNLQAQKLAKEVRIRQAQLSWTRQQEMLAQDAAAKQDMES 150
           LAEIDP   +  L Q +  L   QAQ       ++ AQ+   R + + A+D+ AKQ +++
Sbjct: 120 LAEIDPRPYRIALQQAEGTLAQNQAQ-------LKNAQVDLARYKGLYAEDSIAKQTLDT 172

Query: 151 ADAELRALRADGVSLDAQIRQQRLALASAQTNLSYTRIVAPIDGDVVSISTLEGQTVVAS 210
           A+A++   +    +  AQ+   RL       NL +T+I API G  V +  L+   +VA+
Sbjct: 173 AEAQVAQFQGLVKTNQAQVNDARL-------NLDFTQIRAPISGR-VGLRQLDLGNLVAA 224

Query: 211 FQVPTLMKLADLSTMTVKAQVSEADV------VRVKAGQPVYFTILGDPDKRYYGTLRAV 264
                L+ +     + V   + E ++       R  A  PV     GD   +  G L ++
Sbjct: 225 NDTTALVVITQTEPINVAFTLPETELSTVLERYRSGASLPVEAWDRGDSKLQSTGVLGSI 284

Query: 265 QPSPEKINNAVFFNALFDVPNPDRTLRVDMTAQVAIMLGEAKQALVVPLTALGTRDKDGR 324
               +     + F   F+  N D  L  +    V ++    KQ ++ P  A+     DG 
Sbjct: 285 DNQIDTTTGTLKFKGRFE--NKDLALFPNQFVNVRLLADTLKQVVMAPAAAI-QFGNDG- 340

Query: 325 QEVRVLKADQSVEKRMVRVGISNNFQAQVLEGLKEGDKVI 364
               V+    +V  R ++VG S+   + +L+GLK GD+++
Sbjct: 341 TFAYVVNEQSTVNVRKLKVGASDGENSVILDGLKAGDRLV 380