Pairwise Alignments

Query, 243 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 273 a.a., putative Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  115 bits (289), Expect = 7e-31
 Identities = 77/198 (38%), Positives = 111/198 (56%), Gaps = 4/198 (2%)

Query: 20  PQGPLGGAALTVLLSVGSAVASAVLGLAWGIGLASARGWARAVLTLALAFFRAIPVLMLI 79
           P G L GAALT+ L + S V S +LG A  +   S       V +   +FFR  P+L+ I
Sbjct: 65  PNGFLQGAALTLFLCLCSMVVSVLLGFAAALARLSNSAVLVGVASFYTSFFRGTPLLIQI 124

Query: 80  FWTYFLLPFALGISVPGVLSV-MCALSLVGGAYLAHAVNAGIRGVGQGQWAAGLSLGLTR 138
              Y  LP  +G+ VPG +S  + ALSL  GAYL+    AGI GV +GQ  A L+LG+  
Sbjct: 125 LLIYLGLP-QVGL-VPGAISAGIIALSLNYGAYLSEIFRAGILGVARGQREAALALGMRT 182

Query: 139 WGTLRFIVLPQALRMMLPSFVNQWVTLVKDSSLAYIVGVGELSFVASQVNARTMVYPAEI 198
                 I+LPQA+R+++P   NQ+++++KDSSL  ++GV E+ F+A      +  Y  E+
Sbjct: 183 PQIFCHIILPQAMRVIIPPTANQFISMLKDSSLISVMGVWEVMFLAQSYGRSSYRY-LEM 241

Query: 199 FMLVGAIYWLLCTGLDRL 216
                 IYW+L   L+ L
Sbjct: 242 LTTAAVIYWVLSILLELL 259