Pairwise Alignments

Query, 243 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 223 a.a., amino acid ABC transporter permease from Dickeya dianthicola ME23

 Score =  106 bits (265), Expect = 3e-28
 Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 10/212 (4%)

Query: 12  PYLLWGAFPQGPLGGAALTVLLSVGSAVASAVLGLAWGIGLASARGWARAVLTLALAFFR 71
           P LL G +    +G  ++ + + VG+ +A+        + L+S R W R    L + F+R
Sbjct: 15  PLLLDGLWGTVRIGFTSILIGMLVGALLAA--------MKLSSTRLW-RLPAHLFIGFYR 65

Query: 72  AIPVLMLIFWTYFLLPFALGISVPGVLSVMCALSLVGGAYLAHAVNAGIRGVGQGQWAAG 131
             P ++  FW Y+ LP    +++    + + ALS    A+ A     GI  + +GQW   
Sbjct: 66  NTPAIVHFFWIYYALPVVSPLTLSPFAAAVTALSAQSAAFYAEVYRGGILSIAEGQWEGA 125

Query: 132 LSLGLTRWGTLRFIVLPQALRMMLPSFVNQWVTLVKDSSLAYIVGVGELSFVASQVNART 191
            +LG++R   LR ++LPQALR M+P  + +   L+K +SLA  +  GEL + A Q+N+++
Sbjct: 126 KALGMSRPLALRRVILPQALRRMIPPLIERSFELIKSTSLASSLAYGELLYQAMQINSQS 185

Query: 192 MVYPAEIFMLVGAIYWLLCTGLDRLANMAVRR 223
              P EI+ L   +Y+ L   L  L+    RR
Sbjct: 186 F-RPLEIYSLAALLYFTLLFILSLLSQYVERR 216