Pairwise Alignments

Query, 243 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 385 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

 Score =  105 bits (262), Expect = 1e-27
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 6/197 (3%)

Query: 25  GGAALTVLLSVGSAVASAVLGLAWGIGLASARGWARAVLTLALAFFRAIPVLMLIFWTYF 84
           GG  +T++LS      S   G+   +G  S     + +  L +   R IP++ ++F+   
Sbjct: 174 GGLMVTLILSFFGITVSLPFGILLALGRRSNLPVIKMLCVLFIEVIRGIPLITVLFFASI 233

Query: 85  LLPFAL--GISVPGVLSVMCALSLVGGAYLAHAVNAGIRGVGQGQWAAGLSLGLTRWGTL 142
           +LP  L  G +    L  +  +SL   AY+A  +  G++ + +GQ+    SLGL  W   
Sbjct: 234 MLPLFLPDGWTFDKFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKT 293

Query: 143 RFIVLPQALRMMLPSFVNQWVTLVKDSSLAYIVG----VGELSFVASQVNARTMVYPAEI 198
           R IVLPQAL++++P  VN ++ L KD+SL  I+G    +G ++   +  N  T V     
Sbjct: 294 RLIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGMFDLLGIVTLNQADANWATPVTAMTG 353

Query: 199 FMLVGAIYWLLCTGLDR 215
           ++  G ++W+ C G+ R
Sbjct: 354 YIFAGFVFWIFCFGMSR 370