Pairwise Alignments

Query, 235 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 248 a.a., glutamate / aspartate ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  150 bits (378), Expect = 3e-41
 Identities = 82/220 (37%), Positives = 126/220 (57%), Gaps = 1/220 (0%)

Query: 14  YLGWLLDGWLTTLWVSLLVSAGATVLGVFIAAGRSSSRPALLRATGAYVSLFRNTPLLVQ 73
           YL W + G   T+ +++     A +LG  +   R+     +     AYV LFRN PLLVQ
Sbjct: 21  YLDWYITGLGWTIAIAITAWIIALLLGSLLGVMRTVPNRLVSGIATAYVELFRNVPLLVQ 80

Query: 74  LFFWYFGAPAVLPEAVREWVYAG-HVLSFELLSALVGLTLYAAAYVGEDIRSGIRGVPAG 132
           LF WYF  P +LPE ++EW     +  +  L+S ++ L L+ AA V E +R+GI+ +P G
Sbjct: 81  LFIWYFLVPDLLPEGLQEWFKQDLNPTTSALISVVICLGLFTAARVCEQVRTGIQALPKG 140

Query: 133 QALAASALGFTRAQVMSQVVLPQALRIALPPLLGQYMNIVKNTSLAMAVGLVELSYASRQ 192
           Q  AA A+GF+  Q+ + V+LPQA RI +PPL  +++N+ KN+S+A  +GL+EL   ++Q
Sbjct: 141 QEAAARAMGFSLPQIYNNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ 200

Query: 193 VEAETFKTFQAFGFATLLYIATIGAIELLAAWTARRQGRP 232
               +   F+AF  ATL+Y      + LL     ++   P
Sbjct: 201 TAEFSANLFEAFTLATLIYFTLNMGLMLLMRMVEKKVAVP 240