Pairwise Alignments

Query, 235 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 248 a.a., amino acid ABC transporter permease from Dickeya dianthicola ME23

 Score =  251 bits (640), Expect = 1e-71
 Identities = 133/233 (57%), Positives = 161/233 (69%), Gaps = 8/233 (3%)

Query: 5   LREQLLAPRYLGWLLDGWLTTLWVSLLVSAGATVLGVFIAAGRSSSRPALLRATGAYVSL 64
           L + LLAP+YL WL  G+  TL ++      AT LG+ +AAGR S  P L     AY SL
Sbjct: 11  LTDWLLAPQYLQWLWQGFQITLGIAAAAVVLATSLGLVLAAGRDSRTPLLRWLVVAYCSL 70

Query: 65  FRNTPLLVQLFFWYFGAPAVLPEAVREWVYAGHVL--------SFELLSALVGLTLYAAA 116
           FRNTPLLVQLFFWYFGA  ++P  + +W+ + HV+        SFE L+ L GLTLY+AA
Sbjct: 71  FRNTPLLVQLFFWYFGAAQLMPAGLMQWLNSPHVIPLLGLNGPSFEFLAGLFGLTLYSAA 130

Query: 117 YVGEDIRSGIRGVPAGQALAASALGFTRAQVMSQVVLPQALRIALPPLLGQYMNIVKNTS 176
           ++ E+IR+GI GV  GQ  AA ALG T  Q M  VVLPQALRIALPPLLGQYMN++KN+S
Sbjct: 131 FIAEEIRAGIAGVAHGQKYAACALGLTGWQAMRYVVLPQALRIALPPLLGQYMNVIKNSS 190

Query: 177 LAMAVGLVELSYASRQVEAETFKTFQAFGFATLLYIATIGAIELLAAWTARRQ 229
           LAMA+G+ ELSYASRQVE ET +TFQAFG AT+ YIA I  +E    W   RQ
Sbjct: 191 LAMAIGVAELSYASRQVETETLRTFQAFGVATVCYIAVIALLEGWGQWRQHRQ 243