Pairwise Alignments

Query, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score =  114 bits (285), Expect = 2e-30
 Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 9/252 (3%)

Query: 10  SLALAIGSFTLGGAAWADRLDDVRKAGVLRVAAFDGNPPFGYIDPASKKQVGHDIDLATE 69
           SLAL +G+  L  A   ++L  +++ GV+ V      PPF + D  + K  G +++L+  
Sbjct: 12  SLALLLGAGLLSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDE-NGKLTGFEVELSEL 70

Query: 70  FAKSLGVKIELVPTNPANRIPLLTSGKVDVVFASFTITDERAKAVDFTTPYFLVGQQFL- 128
            AK LGVK ++ PT     +  L S ++DVV    TI++ER K  DF+ PY + G Q L 
Sbjct: 71  LAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYTVSGIQALI 130

Query: 129 ----AKKGVLKDAAQIKDIRIGTEKGTTMESNLRKNYPDAKVVLYDDSPFALAALRNGNV 184
               A++  +K A  +   ++G   GT  E  ++K+ P A V  Y+D P   A LRNG +
Sbjct: 131 LKKKAEQLNIKGAQDLAGKKVGVGLGTNYEQWVKKDVPQADVRTYEDDPSKFADLRNGRI 190

Query: 185 QAITNDGVKLTAQWNAIPDKEKYEIPPITVSKEYLGAAVPKGEARLLEALNTWLVDSEKN 244
            AI  D  +L A   A   K+  E+     S+   G A+ KGE  LL A+N  +   + +
Sbjct: 191 DAILID--RLAALEYAQKAKDT-ELAGDAFSRLESGVALRKGEPELLAAINKAIDKLKAD 247

Query: 245 GRALAIYDTWFG 256
           G    + + +FG
Sbjct: 248 GTLAKLSEKYFG 259