Pairwise Alignments

Query, 323 a.a., Alkanesulfonates-binding protein from Variovorax sp. SCN45

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  111 bits (278), Expect = 2e-29
 Identities = 83/293 (28%), Positives = 134/293 (45%), Gaps = 11/293 (3%)

Query: 18  AAAIAATAAPLFAQTRTQTLRIGYQKFNTLNILKGTGQLEKALAPAGVKVEWSEFLGGSQ 77
           AA + AT   L A    QTL +G Q +N   +++  G LE+        +EW +F  GS 
Sbjct: 8   AATVLATTFSLAAAA--QTLVVGDQSYNARAVMEAAGVLEQL----PYTLEWKQFTAGSP 61

Query: 78  LSEALAAGAIDFGHASDGIGVFQQASGKGLAYLAAESPYPGGVGFLVPRDSPIRGVRDLK 137
           ++EAL  G++D G   D   +F  A G  +  +A       GV  L  +DSPI  ++DL+
Sbjct: 62  VAEALNVGSLDIGLLGDAPPLFLGALGAPIKVIAVSRQNLEGVAILARKDSPIHSLQDLR 121

Query: 138 GKKVVTGRGYNTQYVLIRALEAAGLRYEDIEPVYILTASDTIAAYQSGSVAAIGLWDPFL 197
           GK+    +G  +Q +L  AL+ AG+  + +E  Y L+A D   A   GSV  I  W+P++
Sbjct: 122 GKRAAIWKGSWSQQLLFSALDKAGVPRDAVELRY-LSALDASHALDGGSVDVIATWEPYV 180

Query: 198 AAAQLATDSRLLFDGAGLSGNRTYHFAQPGFARANQEVLRTVFAELRKANEWAQAHPAEV 257
              Q    +R+L    G+   +++  A        +  +      L+KA +W  + PA  
Sbjct: 181 -TQQERQGARVLATADGVIPAQSFVVANSKAVELKRAQIADFLQRLKKARDWTLSAPANT 239

Query: 258 VA---TLAPQLKVEPKVLALATERRQYGVVALTPAIAREQQGLADVFAQLKLI 307
            A     A   + +  +      R +  +  L P +  + Q   D F+ L LI
Sbjct: 240 EAYADAWAKLTRADRDIARAWFARARTDLAPLDPQVIADAQKTVDFFSGLGLI 292