Pairwise Alignments

Query, 323 a.a., Alkanesulfonates-binding protein from Variovorax sp. SCN45

Subject, 321 a.a., ABC transporter, substrate binding protein (aliphatic sulfonate) from Agrobacterium fabrum C58

 Score =  177 bits (448), Expect = 4e-49
 Identities = 113/290 (38%), Positives = 153/290 (52%), Gaps = 6/290 (2%)

Query: 30  AQTRTQTLRIGYQKFNTLNILKGTGQLEKALAPAGVKVEWSEFLGGSQLSEALAAGAIDF 89
           A   T TLRIG+QK   + + K  G LE  L   G++V+WSEF  G  L EAL AGA+D 
Sbjct: 26  AGAATTTLRIGWQKNGVIALAKSQGALEALLKDRGIEVKWSEFSSGPPLLEALGAGALDI 85

Query: 90  GHASDGIGVFQQASGKGLAYLAAESPYPGGVGFLVPRDSPIRGVRDLKGKKVVTGRGYNT 149
           G   D   +F QA+G  L Y+       GG   LV +DSP++ + DLKGKKV   RG + 
Sbjct: 86  GPTGDVPPLFAQAAGGNLRYVGTYKAAAGGSAILVQKDSPLKTLEDLKGKKVAFKRGSSA 145

Query: 150 QYVLIRALEAAGLRYEDIEPVYILTASDTIAAYQSGSVAAIGLWDPFLAAAQLATDSRLL 209
             V ++AL  AGL   DI PV  L   D  AA++SGS+ A  +WDP+ A A+    +R+L
Sbjct: 146 HNVTVKALRKAGLTLSDITPV-DLAPPDAAAAFRSGSIDAWSIWDPYFAVAEKEPTTRVL 204

Query: 210 FDGAGLSGNRTYHFAQPGFARANQEVLRTVFAELRKANEWAQAHPAEVVATLAPQLKVEP 269
               G+    +Y  A   F  AN +++  +  EL      AQA+      +LA    V  
Sbjct: 205 STAEGIVDPWSYFLANGDFVEANPDLVPLILKELANVGAKAQANIDATAKSLAAITGVPE 264

Query: 270 KVLALATER--RQYGVVALTP--AIAREQQGLADVFAQLKLIPKPIEVKD 315
            V  ++  R     G V+L P  AIA  QQ LAD F  LK++PK ++V D
Sbjct: 265 DVTKVSLTRPGADLGRVSLVPDEAIA-YQQALADEFYDLKIVPKKLKVTD 313