Pairwise Alignments

Query, 334 a.a., Probable lipoprotein signal peptide from Variovorax sp. SCN45

Subject, 348 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

 Score =  124 bits (310), Expect = 5e-33
 Identities = 100/339 (29%), Positives = 149/339 (43%), Gaps = 11/339 (3%)

Query: 1   MHLSRLLRSIVCSFGLAATFAQA---AGFSTIEIPADREGPAIRGAVWTPCATPAGDIQL 57
           M L+R + ++V   GL A    A   AG   + +    +   ++   + P        ++
Sbjct: 1   MTLARCVLALVLLGGLLARAEAAPWVAGLHLMTLTDPVDSRPMQALAFYPAVGKTRISRI 60

Query: 58  GRTTIRAVRDCPLAPGAQLPLIVLSHGYGGSYLGHHDTAQALADAGFVVAAISHSSDNFQ 117
               +    + P+A G + PL+VLSHG  GS L  H  A +LA  GFVV A+ H  DN +
Sbjct: 61  DGYPVDVAEEAPVAMG-RFPLLVLSHGNTGSPLALHYLATSLARQGFVVVAVVHPGDNVR 119

Query: 118 IRGGPDDKISALATRTTDIKRLIDHMLQQWPAHDRIAADRIGFYGFSRGGYTGLVLAGAR 177
                   +S L  R   +   I            +   ++G  G+S GG T L+L+GAR
Sbjct: 120 DHSRLGT-LSNLYGRPLQVSAAITAARDDAVVGPYLNDGKVGVIGYSAGGETALILSGAR 178

Query: 178 PDFERLPPLP-SSPCAKDLQSPACTLMRQRFQELLASPLAHDARIKVAVIADPLSTVFDA 236
           PD ERL       P   D       L+  R  EL       D R+   ++  PLS +F  
Sbjct: 179 PDLERLRQYCLERPHDADACKTHGILIADR-SELAPET---DPRVGAVMLMAPLSLLFGR 234

Query: 237 EGLKDVKTPILLWASAYGGDGVTPASVAAVRRNLPVAPEWRVAEKAEHFGFLAPCSPAQI 296
             L  V+ P L+++           +  A+ R LPV P++R+   A HF F+A C   Q 
Sbjct: 235 HALAGVQVPALIYSGDSDQLVAVDRNAEALARKLPVTPDYRLLAGAGHFVFMAHCDAEQY 294

Query: 297 EAKSEICRDAPGFDRTAFHATFNAEVTAFFNRHL-APKP 334
                +C+DA G DR   H +   E  AFF++ L +P P
Sbjct: 295 ARMPALCKDADGVDRRYIHHSLQRETAAFFSQALGSPAP 333