Pairwise Alignments

Query, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  374 bits (961), Expect = e-108
 Identities = 188/314 (59%), Positives = 237/314 (75%), Gaps = 6/314 (1%)

Query: 10  RRTAIATLAALGSGAVLAQGAGSRPVTVRLGYQKSSTLIAVLKAQGVLEKQLAPLNATLS 69
           R+  +A LA+      L     S   T+R+GYQKSSTL+ +LKA+G LE++L      ++
Sbjct: 7   RQLGLALLAS-----ALLPSLASAEQTLRIGYQKSSTLLTLLKARGTLEQRLQAEGIRVT 61

Query: 70  WHEFTSGLPLLEALNLDNLDISADVADTVPVFAQAAGADLTFIAQEAPSPAAQAIVVRED 129
           WHEF SGLPLLEALNL N+D+SADVADTVPVF QAAGA LT+ A+EAPSP AQAI+V  D
Sbjct: 62  WHEFPSGLPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQAILVPAD 121

Query: 130 SPIKTVADLKGKKVGFAKAAGAHYLLIAALDKAGLSFRDIEPAYLTPADGRAAFEKGAID 189
           SP+KT+ADLKGK+V   KAAG+HYLLI AL KAGL+F+DI PAYL PADGRAAFE   +D
Sbjct: 122 SPLKTLADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYLIPADGRAAFENHKVD 181

Query: 190 AWVVWDPFLAAAQRQSKVRVLADGAGIASYQRYYLASTKFAKARPDVLRVVYAELEKTGK 249
           AWV WDP++A+AQRQ   R+L DG+ +ASYQRYYLA + +AKA P+VL+ VY  L + G 
Sbjct: 182 AWVTWDPYVASAQRQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYLALREAGA 241

Query: 250 WVKQNPKDAATLLAPVWG-LDAATIEQANGRRSYAVRPVVAEGLTEQQRIADAFFAEKLL 308
           W K NP+ AA +L P+WG LD+AT++QAN RRSY V+PV  + L EQQRIADAF+ E LL
Sbjct: 242 WTKANPEAAARILGPLWGNLDSATVQQANARRSYDVQPVKLDNLAEQQRIADAFYREGLL 301

Query: 309 PRKIDALNVALFKP 322
           P+ +D   V +++P
Sbjct: 302 PKAVDTSAVDVYQP 315