Pairwise Alignments

Query, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  124 bits (310), Expect = 4e-33
 Identities = 95/299 (31%), Positives = 145/299 (48%), Gaps = 23/299 (7%)

Query: 10  RRTAIATLAALGSGAVLAQGAGSRPVTVRLGYQKSSTLIAVLKAQGVLEKQLAPLNATLS 69
           ++ A   LA   S A  AQ       T+ +G Q S    AV++A GVLE+    L  TL 
Sbjct: 5   KQLAATVLATTFSLAAAAQ-------TLVVGDQ-SYNARAVMEAAGVLEQ----LPYTLE 52

Query: 70  WHEFTSGLPLLEALNLDNLDISADVADTVPVFAQAAGADLTFIAQEAPSPAAQAIVVRED 129
           W +FT+G P+ EALN+ +LDI   + D  P+F  A GA +  IA    +    AI+ R+D
Sbjct: 53  WKQFTAGSPVAEALNVGSLDIGL-LGDAPPLFLGALGAPIKVIAVSRQNLEGVAILARKD 111

Query: 130 SPIKTVADLKGKKVGFAKAAGAHYLLIAALDKAGLSFRDIEPAYLTPADGRAAFEKGAID 189
           SPI ++ DL+GK+    K + +  LL +ALDKAG+    +E  YL+  D   A + G++D
Sbjct: 112 SPIHSLQDLRGKRAAIWKGSWSQQLLFSALDKAGVPRDAVELRYLSALDASHALDGGSVD 171

Query: 190 AWVVWDPFLAAAQRQSKVRVLADGAGIASYQRYYLASTKFAKARPDVLRVVYAELEKTGK 249
               W+P++   +RQ   RVLA   G+   Q + +A++K  + +   +      L+K   
Sbjct: 172 VIATWEPYVTQQERQG-ARVLATADGVIPAQSFVVANSKAVELKRAQIADFLQRLKKARD 230

Query: 250 WVKQNPKDAATLLAPVWG------LDAATIEQANGRRSYAVRPVVAEGLTEQQRIADAF 302
           W    P +     A  W        D A    A  R   A  P+  + + + Q+  D F
Sbjct: 231 WTLSAPANTEA-YADAWAKLTRADRDIARAWFARARTDLA--PLDPQVIADAQKTVDFF 286