Pairwise Alignments

Query, 324 a.a., ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

Subject, 320 a.a., ABC transporter, substrate binding protein (nitrate/sulfonate) from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 1e-38
 Identities = 97/295 (32%), Positives = 147/295 (49%), Gaps = 17/295 (5%)

Query: 12  TAIATLAALGSGAVLAQGAGSRPVTVRLGYQKSSTLIAVL--KAQGVLEKQLAPL---NA 66
           TA+   A L +G+  A+       TV +G+       A+L  K +G ++++       + 
Sbjct: 11  TALVAAALLWAGSAAAE-------TVNIGFMPFVPYSAILLAKQKGWVDEEFTKAGLKDV 63

Query: 67  TLSWHEFTSGLPLLEALNLDNLDISADVADTVPVFAQAAGADLTFIAQEAPSPAAQAIVV 126
            + WH+F  G P+ EA     LDI+A + DT  + A A G D  F+        A+A++V
Sbjct: 64  EIKWHQFAGGPPVNEAFASGALDIAA-LGDTPSLIAFANGIDTRFVGLACKGAKAEALIV 122

Query: 127 REDSPIKTVADLKGKKVGFAKAAGAHYLLIAALDKAGLSFRDIEPAYLTPADGRAAFEKG 186
            +DS +KTV DLKGKKV   +    H LL+  L +AGL   D+E   L   D   A  KG
Sbjct: 123 LKDSSVKTVKDLKGKKVATLRGGNVHELLVLVLAEAGLKISDVEFLNLGLQDMGIALTKG 182

Query: 187 AIDAWVVWDPFLAAAQRQSKVRVLADGAGIASYQRYYLASTKFAKARPDVLRVVYAELEK 246
            +DA +VW+P L     +   R L DGAG+ S     +A   FA   PDVL+     +++
Sbjct: 183 DVDAVLVWEPLLTKLDSEGVSRTLRDGAGLKSNLNPIVALGSFAAKHPDVLKAYLQAVKR 242

Query: 247 TGKWVKQNPKDAATLLAPVWGLDAATIEQANGRRSYAVRPVVAEGLTEQQRIADA 301
             + ++ +P  +A +LAPV GL     E A  R  +  +P V E   +Q  +AD+
Sbjct: 243 GAEALRSDPAGSAQVLAPVVGLTPKQTELAFSR--FEWKPTVTE--ADQAELADS 293