Pairwise Alignments

Query, 281 a.a., Alkanesulfonate ABC transporter permease protein SsuC from Variovorax sp. SCN45

Subject, 273 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  207 bits (526), Expect = 3e-58
 Identities = 107/277 (38%), Positives = 161/277 (58%), Gaps = 8/277 (2%)

Query: 1   MTEQVQELPAVAPAESQGNVFKSFAVNVAKRLVPWLVPVGLIVFWQIASSLGWLSTRVLP 60
           MT + Q LP V P     + +        +RL   ++PV +++  ++   +GWL +  +P
Sbjct: 1   MTSKTQALPLVEPVAINRSAWP-------RRLKGLVLPVLILLVLEVVVRVGWLPSYQMP 53

Query: 61  APVDMVKAAWNLTVSGELWTHVKVSAGRALAGLAIGGGAGLALGLLTGSVKFAETLLDST 120
           AP ++     +L   G LW H+  S GR L G AIG    L      G  + AE  L+ T
Sbjct: 54  APSEIAVTLTDLA-EGSLWKHISASLGRVLLGFAIGASLALVFAAWVGLSREAEAYLEPT 112

Query: 121 IQMVRNIPALALIPLVILWFGIDESAKLFLISVSVFFPIYLNTFHGIRNVDPQLIEMGRT 180
              +R+IP+LA +PL++LW GIDE++K+ LI++  FFP+YLN    IR++D +L+E+G+ 
Sbjct: 113 FAGLRSIPSLAWVPLLLLWLGIDETSKIVLIAIGAFFPVYLNGVAAIRDIDRKLVEVGQM 172

Query: 181 YGLSRWQLYREVILPGALSSILVGLRFSLGLMWVILIVAETISAQAGIGYLTMNAREFLQ 240
           YG SRW+L R ++LP AL  +  GLR  L L W+ L+ AE I+A  G+GYL  + RE  +
Sbjct: 173 YGFSRWRLVRRILLPAALPGLFTGLRSGLSLAWMFLVAAELIAATKGLGYLLSDGRETSR 232

Query: 241 TDIVLVGILLYALLGKLADLFARGLEQWWLRWHPGYQ 277
            DIVL  I++ A LGK++D     LE+  L W   +Q
Sbjct: 233 PDIVLAAIIVLASLGKVSDGLLATLEKRCLAWRDTFQ 269