Pairwise Alignments

Query, 281 a.a., Alkanesulfonate ABC transporter permease protein SsuC from Variovorax sp. SCN45

Subject, 263 a.a., putative transport system permease protein (VIMSS) from Escherichia coli BW25113

 Score =  340 bits (871), Expect = 3e-98
 Identities = 160/249 (64%), Positives = 204/249 (81%)

Query: 31  RLVPWLVPVGLIVFWQIASSLGWLSTRVLPAPVDMVKAAWNLTVSGELWTHVKVSAGRAL 90
           R+ PW +PVG++  WQ+ASS+GWLSTR+LP+P  +V A W L+ SGELW H+ +S+ RAL
Sbjct: 11  RVAPWFLPVGIVAVWQLASSVGWLSTRILPSPEGVVTAFWTLSASGELWQHLAISSWRAL 70

Query: 91  AGLAIGGGAGLALGLLTGSVKFAETLLDSTIQMVRNIPALALIPLVILWFGIDESAKLFL 150
            G +IGG  GL LGL++G  ++ E LLD++IQM+RN+P LALIPLVILWFGIDESAK+FL
Sbjct: 71  IGFSIGGSLGLILGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFL 130

Query: 151 ISVSVFFPIYLNTFHGIRNVDPQLIEMGRTYGLSRWQLYREVILPGALSSILVGLRFSLG 210
           +++   FPIY+NT+HGIRN+D  L+EM R+YGLS   L+  VILPGAL SI+VG+RF+LG
Sbjct: 131 VALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGIPLFIHVILPGALPSIMVGVRFALG 190

Query: 211 LMWVILIVAETISAQAGIGYLTMNAREFLQTDIVLVGILLYALLGKLADLFARGLEQWWL 270
           LMW+ LIVAETISA +GIGYL MNAREFLQTD+V+V I+LYALLGKLAD+ A+ LE+ WL
Sbjct: 191 LMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQLLERLWL 250

Query: 271 RWHPGYQRK 279
           RW+P Y  K
Sbjct: 251 RWNPAYHLK 259