Pairwise Alignments

Query, 318 a.a., Alkanesulfonate ABC transporter substrate-binding protein SsuA from Variovorax sp. SCN45

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  227 bits (578), Expect = 3e-64
 Identities = 127/306 (41%), Positives = 177/306 (57%), Gaps = 8/306 (2%)

Query: 7   PRRRLIQGVAAAVALPSFAALAQAPARQFRIGNQKG--YLTLLKGRGTLEKRLAPLGVSV 64
           P R+L   + A+  LPS A+  Q      RIG QK    LTLLK RGTLE+RL   G+ V
Sbjct: 5   PLRQLGLALLASALLPSLASAEQT----LRIGYQKSSTLLTLLKARGTLEQRLQAEGIRV 60

Query: 65  KWTEFTAGPVQLEALNVGSIDFG-DVGEAPPIFAQAAGAPLAYVGATVVRPQSEAVLVPK 123
            W EF +G   LEALN+G++D   DV +  P+F QAAGA L Y       P ++A+LVP 
Sbjct: 61  TWHEFPSGLPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQAILVPA 120

Query: 124 ASAIKTVAELKGKKIALNKGSNVHYFIVKLFEKHGLSYADLNLVYLPPADARAAFEKGSV 183
            S +KT+A+LKGK++A+ K +  HY +++   K GL++ D+   YL PAD RAAFE   V
Sbjct: 121 DSPLKTLADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYLIPADGRAAFENHKV 180

Query: 184 DAWVIWDPFLAAAEKSLDARILADATGVVGNRAYYFSSLDYVAKNADVLAIAIEELNKID 243
           DAWV WDP++A+A++  +ARIL D + +   + YY +  DY   + +VL      L +  
Sbjct: 181 DAWVTWDPYVASAQRQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYLALREAG 240

Query: 244 VWGAANKAELAGELAALWG-LPKPVAELSVNRSAYGTTPITKAILAEQQKIADTFFDLKL 302
            W  AN    A  L  LWG L     + +  R +Y   P+    LAEQQ+IAD F+   L
Sbjct: 241 AWTKANPEAAARILGPLWGNLDSATVQQANARRSYDVQPVKLDNLAEQQRIADAFYREGL 300

Query: 303 IPKKIN 308
           +PK ++
Sbjct: 301 LPKAVD 306