Pairwise Alignments

Query, 318 a.a., Alkanesulfonate ABC transporter substrate-binding protein SsuA from Variovorax sp. SCN45

Subject, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  145 bits (367), Expect = 1e-39
 Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 15/308 (4%)

Query: 15  VAAAVALPSFAALAQAPARQFRIGNQKGYLTLLKGRGTLEKR--LAPLGVSVKWTEFTAG 72
           VA A+ L   A+ ++      RIG+QKG +     R  LE    L  L   ++W EF A 
Sbjct: 10  VAVALLLAGHASASERLT--LRIGDQKGNM-----RAQLEAADALRDLPYDIRWAEFPAA 62

Query: 73  PVQLEALNVGSIDFGDVGEAPPIFAQAAGAPLAYVGATVVRPQSEAVLVPKASAIKTVAE 132
               EALN G+ID G +G+AP +F  A+GAP+  +      P   A+LV   + +++ AE
Sbjct: 63  APLAEALNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAPLRSAAE 122

Query: 133 LKGKKIALNKGSNVHYFIVKLFEKHGLSYADLNLVYLPPADARAAFEKGSVDAWVIWDPF 192
           LKGK+IA  +GS  H+  +K   + GL+  D+   +L P DA+ A   GSVDAW  W+P+
Sbjct: 123 LKGKRIATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGSVDAWSTWEPY 182

Query: 193 LAAAEKSLDARILADATGV-VGNRAYYFSSLDYVAKNADVLAIAIEELNKI---DVWGAA 248
            A AE S   R+L +  G+  GN   + ++ D   +     A   + LN++    VW   
Sbjct: 183 TALAELSGQGRVLVNGRGLSTGNS--FLAATDKALEEPGRRAALQDYLNRLAAAQVWANQ 240

Query: 249 NKAELAGELAALWGLPKPVAELSVNRSAYGTTPITKAILAEQQKIADTFFDLKLIPKKIN 308
           +    +  LAA+ G P   A L   R       I    + EQQ  AD +    L+ ++++
Sbjct: 241 HLDTYSKTLAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTADFYHTHGLMTERLD 300

Query: 309 VLEAAGAG 316
           V      G
Sbjct: 301 VAPTFATG 308