Pairwise Alignments

Query, 318 a.a., Alkanesulfonate ABC transporter substrate-binding protein SsuA from Variovorax sp. SCN45

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  129 bits (324), Expect = 9e-35
 Identities = 91/298 (30%), Positives = 147/298 (49%), Gaps = 11/298 (3%)

Query: 10  RLIQGVAAAVALPSFAALAQAPARQFRIGNQK-GYLTLLKGRGTLEKRLAPLGVSVKWTE 68
           R  + +AA V   +F+  A A  +   +G+Q      +++  G LE+    L  +++W +
Sbjct: 2   RYFKQLAATVLATTFSLAAAA--QTLVVGDQSYNARAVMEAAGVLEQ----LPYTLEWKQ 55

Query: 69  FTAGPVQLEALNVGSIDFGDVGEAPPIFAQAAGAPLAYVGATVVRPQSEAVLVPKASAIK 128
           FTAG    EALNVGS+D G +G+APP+F  A GAP+  +  +    +  A+L  K S I 
Sbjct: 56  FTAGSPVAEALNVGSLDIGLLGDAPPLFLGALGAPIKVIAVSRQNLEGVAILARKDSPIH 115

Query: 129 TVAELKGKKIALNKGSNVHYFIVKLFEKHGLSYADLNLVYLPPADARAAFEKGSVDAWVI 188
           ++ +L+GK+ A+ KGS     +    +K G+    + L YL   DA  A + GSVD    
Sbjct: 116 SLQDLRGKRAAIWKGSWSQQLLFSALDKAGVPRDAVELRYLSALDASHALDGGSVDVIAT 175

Query: 189 WDPFLAAAEKSLDARILADATGVVGNRAYYFSSLDYVAKNADVLAIAIEELNKIDVW--- 245
           W+P++   E+   AR+LA A GV+  +++  ++   V      +A  ++ L K   W   
Sbjct: 176 WEPYVTQQERQ-GARVLATADGVIPAQSFVVANSKAVELKRAQIADFLQRLKKARDWTLS 234

Query: 246 GAANKAELAGELAALWGLPKPVAELSVNRSAYGTTPITKAILAEQQKIADTFFDLKLI 303
             AN    A   A L    + +A     R+     P+   ++A+ QK  D F  L LI
Sbjct: 235 APANTEAYADAWAKLTRADRDIARAWFARARTDLAPLDPQVIADAQKTVDFFSGLGLI 292